Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC119751.1-201ENST00000513357 765 ntBASIC3.61□□□□□ -1.83
TPM4P67936 AC117525.1-201ENST00000515228 503 ntBASIC3.61□□□□□ -1.83
TPM4P67936 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.61□□□□□ -1.83
TPM4P67936 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.61□□□□□ -1.83
TPM4P67936 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.61□□□□□ -1.83
TPM4P67936 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.61□□□□□ -1.83
TPM4P67936 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.61□□□□□ -1.83
TPM4P67936 AP000619.3-201ENST00000535634 1127 ntBASIC3.61□□□□□ -1.83
TPM4P67936 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.61□□□□□ -1.83
TPM4P67936 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.61□□□□□ -1.83
TPM4P67936 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.61□□□□□ -1.83
TPM4P67936 AC005476.1-201ENST00000554427 397 ntBASIC3.61□□□□□ -1.83
TPM4P67936 AC055876.1-202ENST00000567053 138 ntBASIC3.61□□□□□ -1.83
TPM4P67936 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.61□□□□□ -1.83
TPM4P67936 MAGOH2P-202ENST00000584384 429 ntBASIC3.61□□□□□ -1.83
TPM4P67936 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.61□□□□□ -1.83
TPM4P67936 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TPM4P67936 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.61□□□□□ -1.83
TPM4P67936 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
TPM4P67936 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
TPM4P67936 AL353743.1-202ENST00000431724 1695 ntBASIC3.6□□□□□ -1.83
TPM4P67936 AC126755.2-208ENST00000327792 462 ntBASIC3.6□□□□□ -1.83
TPM4P67936 AC138969.1-213ENST00000331436 462 ntBASIC3.6□□□□□ -1.83
TPM4P67936 RNU1-70P-201ENST00000362618 164 ntBASIC3.6□□□□□ -1.83
TPM4P67936 RNU6-31P-201ENST00000384388 108 ntBASIC3.6□□□□□ -1.83
TPM4P67936 RPL21P17-201ENST00000397467 475 ntBASIC3.6□□□□□ -1.83
TPM4P67936 EI24P1-201ENST00000416584 867 ntBASIC3.6□□□□□ -1.83
TPM4P67936 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.6□□□□□ -1.83
TPM4P67936 AC007563.3-201ENST00000433233 371 ntBASIC3.6□□□□□ -1.83
TPM4P67936 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.6□□□□□ -1.83
TPM4P67936 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.6□□□□□ -1.83
TPM4P67936 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.6□□□□□ -1.83
TPM4P67936 AC025518.1-201ENST00000479856 347 ntBASIC3.6□□□□□ -1.83
TPM4P67936 NCOR1P1-202ENST00000486162 291 ntBASIC3.6□□□□□ -1.83
TPM4P67936 AC005726.1-201ENST00000494679 427 ntBASIC3.6□□□□□ -1.83
TPM4P67936 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC3.6□□□□□ -1.83
TPM4P67936 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.6□□□□□ -1.83
TPM4P67936 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.6□□□□□ -1.83
TPM4P67936 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.6□□□□□ -1.83
TPM4P67936 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.6□□□□□ -1.83
TPM4P67936 SYF2P1-201ENST00000550658 413 ntBASIC3.6□□□□□ -1.83
TPM4P67936 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC3.6□□□□□ -1.83
TPM4P67936 AC007224.1-201ENST00000564410 144 ntBASIC3.6□□□□□ -1.83
TPM4P67936 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.6□□□□□ -1.83
TPM4P67936 MIR3690-201ENST00000580266 75 ntBASIC3.6□□□□□ -1.83
TPM4P67936 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.6□□□□□ -1.83
TPM4P67936 AF230666.2-201ENST00000602328 725 ntBASIC3.6□□□□□ -1.83
TPM4P67936 HMGB1P51-201ENST00000605166 638 ntBASIC3.6□□□□□ -1.83
TPM4P67936 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.6□□□□□ -1.83
TPM4P67936 MIR6864-201ENST00000617935 70 ntBASIC3.6□□□□□ -1.83
TPM4P67936 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.6□□□□□ -1.83
TPM4P67936 MTND5P7-201ENST00000413558 1798 ntBASIC3.6□□□□□ -1.83
TPM4P67936 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.6□□□□□ -1.83
TPM4P67936 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.6□□□□□ -1.83
TPM4P67936 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TPM4P67936 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
TPM4P67936 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.6□□□□□ -1.83
TPM4P67936 AL672296.1-201ENST00000427780 2158 ntBASIC3.59□□□□□ -1.83
TPM4P67936 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
TPM4P67936 RNA5SP119-201ENST00000362715 117 ntBASIC3.59□□□□□ -1.83
TPM4P67936 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TPM4P67936 SNORD17-201ENST00000390930 237 ntBASIC3.59□□□□□ -1.83
TPM4P67936 DNAJC19P6-201ENST00000401853 280 ntBASIC3.59□□□□□ -1.83
TPM4P67936 RNA5SP229-201ENST00000410809 99 ntBASIC3.59□□□□□ -1.83
TPM4P67936 RNA5SP344-201ENST00000411081 104 ntBASIC3.59□□□□□ -1.83
TPM4P67936 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.59□□□□□ -1.83
TPM4P67936 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.59□□□□□ -1.83
TPM4P67936 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.59□□□□□ -1.83
TPM4P67936 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.59□□□□□ -1.83
TPM4P67936 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.59□□□□□ -1.83
TPM4P67936 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.59□□□□□ -1.83
TPM4P67936 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC3.59□□□□□ -1.83
TPM4P67936 ATP5JP1-201ENST00000431631 322 ntBASIC3.59□□□□□ -1.83
TPM4P67936 CKS1BP5-201ENST00000434172 273 ntBASIC3.59□□□□□ -1.83
TPM4P67936 AL590103.1-201ENST00000434488 307 ntBASIC3.59□□□□□ -1.83
TPM4P67936 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.59□□□□□ -1.83
TPM4P67936 AC006994.1-201ENST00000438212 839 ntBASIC3.59□□□□□ -1.83
TPM4P67936 ARL5AP3-201ENST00000439327 386 ntBASIC3.59□□□□□ -1.83
TPM4P67936 AC023512.1-201ENST00000444513 499 ntBASIC3.59□□□□□ -1.83
TPM4P67936 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.59□□□□□ -1.83
TPM4P67936 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.59□□□□□ -1.83
TPM4P67936 RPL37P3-201ENST00000456825 293 ntBASIC3.59□□□□□ -1.83
TPM4P67936 AC096992.1-201ENST00000459808 709 ntBASIC3.59□□□□□ -1.83
TPM4P67936 RPL7P5-201ENST00000471472 736 ntBASIC3.59□□□□□ -1.83
TPM4P67936 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
TPM4P67936 RPS4XP13-201ENST00000483219 789 ntBASIC3.59□□□□□ -1.83
TPM4P67936 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TPM4P67936 RN7SKP244-201ENST00000516513 307 ntBASIC3.59□□□□□ -1.83
TPM4P67936 IGKV2-26-201ENST00000518305 343 ntBASIC3.59□□□□□ -1.83
TPM4P67936 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.59□□□□□ -1.83
TPM4P67936 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.59□□□□□ -1.83
TPM4P67936 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.59□□□□□ -1.83
TPM4P67936 AC245128.3-201ENST00000594721 748 ntBASIC3.59□□□□□ -1.83
TPM4P67936 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.59□□□□□ -1.83
TPM4P67936 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
TPM4P67936 AC108206.1-201ENST00000570186 4159 ntBASIC3.59□□□□□ -1.84
TPM4P67936 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.84
TPM4P67936 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.59□□□□□ -1.84
TPM4P67936 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.58□□□□□ -1.84
TPM4P67936 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms