Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
RHBDL3P58872 RNU6-878P-201ENST00000384578 110 ntBASIC5.08□□□□□ -1.6
RHBDL3P58872 MIR134-201ENST00000385258 73 ntBASIC5.08□□□□□ -1.6
RHBDL3P58872 RNU6-821P-201ENST00000390995 107 ntBASIC5.08□□□□□ -1.6
RHBDL3P58872 AC016769.3-201ENST00000396562 315 ntBASIC5.08□□□□□ -1.6
RHBDL3P58872 SNRPEP2-201ENST00000397592 279 ntBASIC5.08□□□□□ -1.6
RHBDL3P58872 MIR1911-201ENST00000410783 80 ntBASIC5.08□□□□□ -1.6
RHBDL3P58872 ELOCP9-201ENST00000418624 239 ntBASIC5.08□□□□□ -1.6
RHBDL3P58872 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.08□□□□□ -1.6
RHBDL3P58872 AC012065.2-201ENST00000421295 375 ntBASIC5.08□□□□□ -1.6
RHBDL3P58872 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.08□□□□□ -1.6
RHBDL3P58872 AL117339.2-201ENST00000430475 180 ntBASIC5.08□□□□□ -1.6
RHBDL3P58872 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.08□□□□□ -1.6
RHBDL3P58872 CDC27P1-201ENST00000445384 715 ntBASIC5.08□□□□□ -1.6
RHBDL3P58872 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.08□□□□□ -1.6
RHBDL3P58872 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.08□□□□□ -1.6
RHBDL3P58872 HMGN2P21-201ENST00000447764 270 ntBASIC5.08□□□□□ -1.6
RHBDL3P58872 AP000873.1-201ENST00000463987 400 ntBASIC5.08□□□□□ -1.6
RHBDL3P58872 AC112206.1-201ENST00000468416 477 ntBASIC5.08□□□□□ -1.6
RHBDL3P58872 AL132838.2-201ENST00000492041 314 ntBASIC5.08□□□□□ -1.6
RHBDL3P58872 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC5.08□□□□□ -1.6
RHBDL3P58872 AC116353.3-201ENST00000511215 249 ntBASIC5.08□□□□□ -1.6
RHBDL3P58872 AC138938.1-201ENST00000515431 782 ntBASIC5.08□□□□□ -1.6
RHBDL3P58872 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.08□□□□□ -1.6
RHBDL3P58872 AC008694.2-201ENST00000517591 306 ntBASIC5.08□□□□□ -1.6
RHBDL3P58872 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC5.08□□□□□ -1.6
RHBDL3P58872 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.08□□□□□ -1.6
RHBDL3P58872 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.08□□□□□ -1.6
RHBDL3P58872 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC5.08□□□□□ -1.6
RHBDL3P58872 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC5.08□□□□□ -1.6
RHBDL3P58872 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.08□□□□□ -1.6
RHBDL3P58872 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.08□□□□□ -1.6
RHBDL3P58872 MIR4637-201ENST00000582405 84 ntBASIC5.08□□□□□ -1.6
RHBDL3P58872 AC093227.2-201ENST00000589357 285 ntBASIC5.08□□□□□ -1.6
RHBDL3P58872 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.08□□□□□ -1.6
RHBDL3P58872 AC034229.4-201ENST00000607861 441 ntBASIC5.08□□□□□ -1.6
RHBDL3P58872 AC007349.4-201ENST00000608114 532 ntBASIC5.08□□□□□ -1.6
RHBDL3P58872 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.08□□□□□ -1.6
RHBDL3P58872 AC092650.2-201ENST00000619984 902 ntBASIC5.08□□□□□ -1.6
RHBDL3P58872 AL161637.1-201ENST00000622380 412 ntBASIC5.08□□□□□ -1.6
RHBDL3P58872 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RHBDL3P58872 AC112484.5-201ENST00000624189 228 ntBASIC5.08□□□□□ -1.6
RHBDL3P58872 U6.101-201ENST00000637707 76 ntBASIC5.08□□□□□ -1.6
RHBDL3P58872 MIR1322-201ENST00000638013 71 ntBASIC5.08□□□□□ -1.6
RHBDL3P58872 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
RHBDL3P58872 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
RHBDL3P58872 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.08□□□□□ -1.6
RHBDL3P58872 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RHBDL3P58872 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.08□□□□□ -1.6
RHBDL3P58872 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
RHBDL3P58872 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
RHBDL3P58872 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RHBDL3P58872 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
RHBDL3P58872 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.07□□□□□ -1.6
RHBDL3P58872 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.07□□□□□ -1.6
RHBDL3P58872 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
RHBDL3P58872 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RHBDL3P58872 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RHBDL3P58872 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
RHBDL3P58872 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RHBDL3P58872 Y_RNA.192-201ENST00000363977 102 ntBASIC5.07□□□□□ -1.6
RHBDL3P58872 RNU1-44P-201ENST00000384453 163 ntBASIC5.07□□□□□ -1.6
RHBDL3P58872 SNORD96B-201ENST00000386148 79 ntBASIC5.07□□□□□ -1.6
RHBDL3P58872 SNORD66.1-201ENST00000391230 76 ntBASIC5.07□□□□□ -1.6
RHBDL3P58872 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RHBDL3P58872 RN7SKP27-201ENST00000410684 333 ntBASIC5.07□□□□□ -1.6
RHBDL3P58872 AC006548.1-201ENST00000427470 102 ntBASIC5.07□□□□□ -1.6
RHBDL3P58872 ATP5F1P1-201ENST00000433775 569 ntBASIC5.07□□□□□ -1.6
RHBDL3P58872 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.07□□□□□ -1.6
RHBDL3P58872 Z73417.1-201ENST00000447373 778 ntBASIC5.07□□□□□ -1.6
RHBDL3P58872 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.07□□□□□ -1.6
RHBDL3P58872 RNA5SP246-201ENST00000458909 119 ntBASIC5.07□□□□□ -1.6
RHBDL3P58872 AC078817.1-201ENST00000492623 435 ntBASIC5.07□□□□□ -1.6
RHBDL3P58872 AC104164.2-201ENST00000496953 495 ntBASIC5.07□□□□□ -1.6
RHBDL3P58872 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RHBDL3P58872 VWA8P1-201ENST00000510889 176 ntBASIC5.07□□□□□ -1.6
RHBDL3P58872 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC5.07□□□□□ -1.6
RHBDL3P58872 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.07□□□□□ -1.6
RHBDL3P58872 AC105233.3-201ENST00000531125 744 ntBASIC5.07□□□□□ -1.6
RHBDL3P58872 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.07□□□□□ -1.6
RHBDL3P58872 AC006064.5-201ENST00000541782 248 ntBASIC5.07□□□□□ -1.6
RHBDL3P58872 REXO2-218ENST00000544827 880 ntTSL 3 BASIC5.07□□□□□ -1.6
RHBDL3P58872 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.07□□□□□ -1.6
RHBDL3P58872 AC007424.1-203ENST00000554613 687 ntBASIC5.07□□□□□ -1.6
RHBDL3P58872 HSPE1P3-201ENST00000559254 309 ntBASIC5.07□□□□□ -1.6
RHBDL3P58872 AC079171.1-201ENST00000568788 914 ntBASIC5.07□□□□□ -1.6
RHBDL3P58872 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.07□□□□□ -1.6
RHBDL3P58872 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.07□□□□□ -1.6
RHBDL3P58872 AC022916.3-201ENST00000592961 742 ntBASIC5.07□□□□□ -1.6
RHBDL3P58872 AC243773.3-201ENST00000613270 256 ntBASIC5.07□□□□□ -1.6
RHBDL3P58872 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.07□□□□□ -1.6
RHBDL3P58872 AC015871.5-202ENST00000623252 701 ntBASIC5.07□□□□□ -1.6
RHBDL3P58872 CR381572.1-201ENST00000625098 102 ntBASIC5.07□□□□□ -1.6
RHBDL3P58872 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.07□□□□□ -1.6
RHBDL3P58872 MTND2P41-201ENST00000637599 773 ntBASIC5.07□□□□□ -1.6
RHBDL3P58872 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
RHBDL3P58872 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RHBDL3P58872 MAPK10-286ENST00000641208 8747 ntBASIC5.07□□□□□ -1.6
RHBDL3P58872 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RHBDL3P58872 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms