Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 VN1R42P-201ENST00000424651 344 ntBASIC3.95□□□□□ -1.78
HMGCS2P54868 AL356535.1-201ENST00000440335 398 ntBASIC3.95□□□□□ -1.78
HMGCS2P54868 MOB1AP2-201ENST00000446060 614 ntBASIC3.95□□□□□ -1.78
HMGCS2P54868 RPS29P31-201ENST00000446147 164 ntBASIC3.95□□□□□ -1.78
HMGCS2P54868 XKRYP5-201ENST00000449659 483 ntBASIC3.95□□□□□ -1.78
HMGCS2P54868 AP001992.1-205ENST00000462248 379 ntBASIC3.95□□□□□ -1.78
HMGCS2P54868 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.95□□□□□ -1.78
HMGCS2P54868 AC016550.1-201ENST00000505348 785 ntBASIC3.95□□□□□ -1.78
HMGCS2P54868 RNU6-334P-201ENST00000517072 102 ntBASIC3.95□□□□□ -1.78
HMGCS2P54868 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.95□□□□□ -1.78
HMGCS2P54868 AC008489.1-201ENST00000524271 483 ntBASIC3.95□□□□□ -1.78
HMGCS2P54868 C1DP5-201ENST00000525775 383 ntBASIC3.95□□□□□ -1.78
HMGCS2P54868 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.95□□□□□ -1.78
HMGCS2P54868 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.95□□□□□ -1.78
HMGCS2P54868 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.95□□□□□ -1.78
HMGCS2P54868 AC006518.1-201ENST00000541449 943 ntBASIC3.95□□□□□ -1.78
HMGCS2P54868 AC093510.2-201ENST00000562820 896 ntBASIC3.95□□□□□ -1.78
HMGCS2P54868 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.95□□□□□ -1.78
HMGCS2P54868 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.95□□□□□ -1.78
HMGCS2P54868 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.95□□□□□ -1.78
HMGCS2P54868 VN1R84P-201ENST00000593697 235 ntBASIC3.95□□□□□ -1.78
HMGCS2P54868 AC116563.2-201ENST00000624751 535 ntBASIC3.95□□□□□ -1.78
HMGCS2P54868 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.95□□□□□ -1.78
HMGCS2P54868 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.95□□□□□ -1.78
HMGCS2P54868 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HMGCS2P54868 MFSD8-233ENST00000641482 4860 ntBASIC3.95□□□□□ -1.78
HMGCS2P54868 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
HMGCS2P54868 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HMGCS2P54868 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.95□□□□□ -1.78
HMGCS2P54868 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.95□□□□□ -1.78
HMGCS2P54868 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HMGCS2P54868 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HMGCS2P54868 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.94□□□□□ -1.78
HMGCS2P54868 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HMGCS2P54868 UBA52P6-201ENST00000399822 382 ntBASIC3.94□□□□□ -1.78
HMGCS2P54868 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.94□□□□□ -1.78
HMGCS2P54868 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.94□□□□□ -1.78
HMGCS2P54868 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.94□□□□□ -1.78
HMGCS2P54868 HSFY7P-201ENST00000432672 318 ntBASIC3.94□□□□□ -1.78
HMGCS2P54868 HSFY8P-201ENST00000437934 318 ntBASIC3.94□□□□□ -1.78
HMGCS2P54868 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.94□□□□□ -1.78
HMGCS2P54868 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.94□□□□□ -1.78
HMGCS2P54868 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.94□□□□□ -1.78
HMGCS2P54868 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.94□□□□□ -1.78
HMGCS2P54868 AC097262.1-201ENST00000452559 548 ntBASIC3.94□□□□□ -1.78
HMGCS2P54868 HSFY5P-201ENST00000453726 309 ntBASIC3.94□□□□□ -1.78
HMGCS2P54868 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.94□□□□□ -1.78
HMGCS2P54868 AC121161.1-201ENST00000510606 652 ntBASIC3.94□□□□□ -1.78
HMGCS2P54868 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.94□□□□□ -1.78
HMGCS2P54868 AC133963.2-201ENST00000513686 578 ntBASIC3.94□□□□□ -1.78
HMGCS2P54868 HNRNPKP5-201ENST00000515300 253 ntBASIC3.94□□□□□ -1.78
HMGCS2P54868 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.94□□□□□ -1.78
HMGCS2P54868 MYL12AP1-201ENST00000518490 515 ntBASIC3.94□□□□□ -1.78
HMGCS2P54868 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.94□□□□□ -1.78
HMGCS2P54868 CIR1P1-201ENST00000524055 1133 ntBASIC3.94□□□□□ -1.78
HMGCS2P54868 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.94□□□□□ -1.78
HMGCS2P54868 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.94□□□□□ -1.78
HMGCS2P54868 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.94□□□□□ -1.78
HMGCS2P54868 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.94□□□□□ -1.78
HMGCS2P54868 AL355816.1-201ENST00000607951 118 ntBASIC3.94□□□□□ -1.78
HMGCS2P54868 AC026422.1-201ENST00000623961 452 ntBASIC3.94□□□□□ -1.78
HMGCS2P54868 MIR6715B-201ENST00000637172 77 ntBASIC3.94□□□□□ -1.78
HMGCS2P54868 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.94□□□□□ -1.78
HMGCS2P54868 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
HMGCS2P54868 MAPK10-373ENST00000641983 6772 ntBASIC3.94□□□□□ -1.78
HMGCS2P54868 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.93□□□□□ -1.78
HMGCS2P54868 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HMGCS2P54868 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.93□□□□□ -1.78
HMGCS2P54868 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.93□□□□□ -1.78
HMGCS2P54868 RPL23AP57-201ENST00000332361 466 ntBASIC3.93□□□□□ -1.78
HMGCS2P54868 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
HMGCS2P54868 RWDD4P2-201ENST00000426392 563 ntBASIC3.93□□□□□ -1.78
HMGCS2P54868 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.93□□□□□ -1.78
HMGCS2P54868 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.93□□□□□ -1.78
HMGCS2P54868 HMGN1P5-201ENST00000448591 263 ntBASIC3.93□□□□□ -1.78
HMGCS2P54868 HMGB3P22-202ENST00000451823 572 ntBASIC3.93□□□□□ -1.78
HMGCS2P54868 RPL32P14-201ENST00000463196 378 ntBASIC3.93□□□□□ -1.78
HMGCS2P54868 RPS26P3-201ENST00000470205 348 ntBASIC3.93□□□□□ -1.78
HMGCS2P54868 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
HMGCS2P54868 CYCSP20-201ENST00000473154 315 ntBASIC3.93□□□□□ -1.78
HMGCS2P54868 AC004057.1-201ENST00000485827 348 ntBASIC3.93□□□□□ -1.78
HMGCS2P54868 AC139783.2-201ENST00000504847 1145 ntBASIC3.93□□□□□ -1.78
HMGCS2P54868 AC110794.1-201ENST00000505816 425 ntBASIC3.93□□□□□ -1.78
HMGCS2P54868 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.93□□□□□ -1.78
HMGCS2P54868 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.93□□□□□ -1.78
HMGCS2P54868 RN7SKP83-201ENST00000516512 178 ntBASIC3.93□□□□□ -1.78
HMGCS2P54868 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.93□□□□□ -1.78
HMGCS2P54868 RN7SKP289-201ENST00000517244 295 ntBASIC3.93□□□□□ -1.78
HMGCS2P54868 AP000926.4-201ENST00000527351 454 ntBASIC3.93□□□□□ -1.78
HMGCS2P54868 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.93□□□□□ -1.78
HMGCS2P54868 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.93□□□□□ -1.78
HMGCS2P54868 DUXAP6-201ENST00000553858 601 ntBASIC3.93□□□□□ -1.78
HMGCS2P54868 AC104229.1-201ENST00000561364 255 ntBASIC3.93□□□□□ -1.78
HMGCS2P54868 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.93□□□□□ -1.78
HMGCS2P54868 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.93□□□□□ -1.78
HMGCS2P54868 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.93□□□□□ -1.78
HMGCS2P54868 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.93□□□□□ -1.78
HMGCS2P54868 BNIP3P39-201ENST00000601077 554 ntBASIC3.93□□□□□ -1.78
HMGCS2P54868 AC008638.3-201ENST00000603341 463 ntBASIC3.93□□□□□ -1.78
HMGCS2P54868 AL162274.2-201ENST00000614406 332 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms