Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CLTCL1P53675 AL049874.4-201ENST00000557593 255 ntBASIC4.17□□□□□ -1.74
CLTCL1P53675 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.17□□□□□ -1.74
CLTCL1P53675 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CLTCL1P53675 AL356490.1-201ENST00000623079 479 ntBASIC4.17□□□□□ -1.74
CLTCL1P53675 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLTCL1P53675 AC017002.4-201ENST00000604721 1525 ntBASIC4.16□□□□□ -1.74
CLTCL1P53675 RNU6-851P-201ENST00000384565 107 ntBASIC4.16□□□□□ -1.74
CLTCL1P53675 MIR1183-201ENST00000408856 89 ntBASIC4.16□□□□□ -1.74
CLTCL1P53675 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.16□□□□□ -1.74
CLTCL1P53675 RPL32P35-201ENST00000415214 394 ntBASIC4.16□□□□□ -1.74
CLTCL1P53675 RPL21P40-201ENST00000428586 483 ntBASIC4.16□□□□□ -1.74
CLTCL1P53675 AL162389.1-201ENST00000449233 177 ntBASIC4.16□□□□□ -1.74
CLTCL1P53675 DNAJC19P8-201ENST00000452887 259 ntBASIC4.16□□□□□ -1.74
CLTCL1P53675 AC126389.1-201ENST00000477436 290 ntBASIC4.16□□□□□ -1.74
CLTCL1P53675 RPL31P13-201ENST00000484151 370 ntBASIC4.16□□□□□ -1.74
CLTCL1P53675 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.16□□□□□ -1.74
CLTCL1P53675 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.16□□□□□ -1.74
CLTCL1P53675 ELOCP29-201ENST00000588193 334 ntBASIC4.16□□□□□ -1.74
CLTCL1P53675 NRBF2P5-201ENST00000603087 788 ntBASIC4.16□□□□□ -1.74
CLTCL1P53675 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.16□□□□□ -1.74
CLTCL1P53675 THAP12P8-201ENST00000447914 2115 ntBASIC4.16□□□□□ -1.74
CLTCL1P53675 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLTCL1P53675 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
CLTCL1P53675 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.15□□□□□ -1.74
CLTCL1P53675 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.15□□□□□ -1.74
CLTCL1P53675 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CLTCL1P53675 OOSP1P1-201ENST00000423265 274 ntBASIC4.15□□□□□ -1.74
CLTCL1P53675 AC073069.1-201ENST00000428657 441 ntBASIC4.15□□□□□ -1.74
CLTCL1P53675 ARL5AP4-201ENST00000430731 512 ntBASIC4.15□□□□□ -1.74
CLTCL1P53675 RPS3P1-201ENST00000456781 192 ntBASIC4.15□□□□□ -1.74
CLTCL1P53675 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CLTCL1P53675 AC096947.1-201ENST00000603233 470 ntBASIC4.15□□□□□ -1.74
CLTCL1P53675 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLTCL1P53675 AC116096.1-201ENST00000566804 2314 ntBASIC4.14□□□□□ -1.75
CLTCL1P53675 RNU1-112P-201ENST00000364401 164 ntBASIC4.14□□□□□ -1.75
CLTCL1P53675 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLTCL1P53675 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC4.14□□□□□ -1.75
CLTCL1P53675 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.14□□□□□ -1.75
CLTCL1P53675 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.14□□□□□ -1.75
CLTCL1P53675 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.14□□□□□ -1.75
CLTCL1P53675 OR6R2P-201ENST00000609216 300 ntBASIC4.14□□□□□ -1.75
CLTCL1P53675 AL591516.1-201ENST00000611326 274 ntBASIC4.14□□□□□ -1.75
CLTCL1P53675 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLTCL1P53675 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLTCL1P53675 RNU4-82P-201ENST00000362443 140 ntBASIC4.13□□□□□ -1.75
CLTCL1P53675 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
CLTCL1P53675 SNORA46-201ENST00000384762 135 ntBASIC4.13□□□□□ -1.75
CLTCL1P53675 SKINT1L-201ENST00000401057 817 ntBASIC4.13□□□□□ -1.75
CLTCL1P53675 RNU2-52P-201ENST00000410680 190 ntBASIC4.13□□□□□ -1.75
CLTCL1P53675 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLTCL1P53675 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.13□□□□□ -1.75
CLTCL1P53675 SNORD109B-201ENST00000458961 67 ntBASIC4.13□□□□□ -1.75
CLTCL1P53675 SNORD109A-201ENST00000459128 67 ntBASIC4.13□□□□□ -1.75
CLTCL1P53675 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.13□□□□□ -1.75
CLTCL1P53675 AC010486.1-201ENST00000511793 424 ntBASIC4.13□□□□□ -1.75
CLTCL1P53675 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLTCL1P53675 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.13□□□□□ -1.75
CLTCL1P53675 AL049844.2-201ENST00000604280 628 ntBASIC4.13□□□□□ -1.75
CLTCL1P53675 AC136601.2-201ENST00000604356 474 ntBASIC4.13□□□□□ -1.75
CLTCL1P53675 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.13□□□□□ -1.75
CLTCL1P53675 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CLTCL1P53675 AC005183.1-201ENST00000603687 1979 ntBASIC4.13□□□□□ -1.75
CLTCL1P53675 RAB6C-AS1-202ENST00000433431 123 ntBASIC4.13□□□□□ -1.75
CLTCL1P53675 CYCSP20-201ENST00000473154 315 ntBASIC4.13□□□□□ -1.75
CLTCL1P53675 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.13□□□□□ -1.75
CLTCL1P53675 AC091515.1-201ENST00000548110 679 ntBASIC4.13□□□□□ -1.75
CLTCL1P53675 AC009101.1-201ENST00000568135 242 ntBASIC4.13□□□□□ -1.75
CLTCL1P53675 AC011492.1-201ENST00000600023 315 ntBASIC4.13□□□□□ -1.75
CLTCL1P53675 AC092628.2-201ENST00000622492 339 ntBASIC4.13□□□□□ -1.75
CLTCL1P53675 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLTCL1P53675 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLTCL1P53675 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLTCL1P53675 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CLTCL1P53675 RNA5SP21-201ENST00000410917 96 ntBASIC4.12□□□□□ -1.75
CLTCL1P53675 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.12□□□□□ -1.75
CLTCL1P53675 KRTAP19-11P-201ENST00000439851 104 ntBASIC4.12□□□□□ -1.75
CLTCL1P53675 AC245517.2-201ENST00000442890 346 ntBASIC4.12□□□□□ -1.75
CLTCL1P53675 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.12□□□□□ -1.75
CLTCL1P53675 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.12□□□□□ -1.75
CLTCL1P53675 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.12□□□□□ -1.75
CLTCL1P53675 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CLTCL1P53675 AL583834.1-201ENST00000406943 343 ntBASIC4.11□□□□□ -1.75
CLTCL1P53675 OR2AS1P-201ENST00000427827 319 ntBASIC4.11□□□□□ -1.75
CLTCL1P53675 RAB28P3-201ENST00000448325 597 ntBASIC4.11□□□□□ -1.75
CLTCL1P53675 RPL29P29-201ENST00000448725 423 ntBASIC4.11□□□□□ -1.75
CLTCL1P53675 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.11□□□□□ -1.75
CLTCL1P53675 RN7SL432P-201ENST00000484057 298 ntBASIC4.11□□□□□ -1.75
CLTCL1P53675 AC114967.1-201ENST00000504890 259 ntBASIC4.11□□□□□ -1.75
CLTCL1P53675 SETP12-201ENST00000514068 805 ntBASIC4.11□□□□□ -1.75
CLTCL1P53675 AC103783.1-201ENST00000520506 373 ntBASIC4.11□□□□□ -1.75
CLTCL1P53675 AC007954.1-201ENST00000554198 494 ntBASIC4.11□□□□□ -1.75
CLTCL1P53675 AC104763.2-201ENST00000604179 382 ntBASIC4.11□□□□□ -1.75
CLTCL1P53675 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLTCL1P53675 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CLTCL1P53675 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CLTCL1P53675 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC4.11□□□□□ -1.75
CLTCL1P53675 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLTCL1P53675 RNU6-805P-201ENST00000365643 106 ntBASIC4.1□□□□□ -1.75
CLTCL1P53675 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms