Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 RNA5SP246-201ENST00000458909 119 ntBASIC4.18□□□□□ -1.74
LIMK1P53667 AC012158.1-204ENST00000483430 465 ntBASIC4.18□□□□□ -1.74
LIMK1P53667 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.18□□□□□ -1.74
LIMK1P53667 KRT19P6-201ENST00000510983 209 ntBASIC4.18□□□□□ -1.74
LIMK1P53667 SCARNA1-201ENST00000517138 166 ntBASIC4.18□□□□□ -1.74
LIMK1P53667 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LIMK1P53667 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.18□□□□□ -1.74
LIMK1P53667 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.18□□□□□ -1.74
LIMK1P53667 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.18□□□□□ -1.74
LIMK1P53667 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
LIMK1P53667 MTCYBP23-201ENST00000558717 1102 ntBASIC4.18□□□□□ -1.74
LIMK1P53667 EIF5A2P1-201ENST00000564027 460 ntBASIC4.18□□□□□ -1.74
LIMK1P53667 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.18□□□□□ -1.74
LIMK1P53667 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.18□□□□□ -1.74
LIMK1P53667 AC010201.1-201ENST00000605051 540 ntBASIC4.18□□□□□ -1.74
LIMK1P53667 AL159169.3-201ENST00000608871 561 ntBASIC4.18□□□□□ -1.74
LIMK1P53667 AL021997.2-201ENST00000615674 271 ntBASIC4.18□□□□□ -1.74
LIMK1P53667 AL138721.1-201ENST00000616756 179 ntBASIC4.18□□□□□ -1.74
LIMK1P53667 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
LIMK1P53667 AL357559.1-201ENST00000622228 274 ntBASIC4.18□□□□□ -1.74
LIMK1P53667 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
LIMK1P53667 AC009093.8-201ENST00000641769 292 ntBASIC4.18□□□□□ -1.74
LIMK1P53667 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.18□□□□□ -1.74
LIMK1P53667 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
LIMK1P53667 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
LIMK1P53667 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
LIMK1P53667 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.18□□□□□ -1.74
LIMK1P53667 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
LIMK1P53667 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.17□□□□□ -1.74
LIMK1P53667 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.17□□□□□ -1.74
LIMK1P53667 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LIMK1P53667 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LIMK1P53667 AC016588.2-201ENST00000632484 3021 ntBASIC4.17□□□□□ -1.74
LIMK1P53667 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.17□□□□□ -1.74
LIMK1P53667 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
LIMK1P53667 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LIMK1P53667 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.17□□□□□ -1.74
LIMK1P53667 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.17□□□□□ -1.74
LIMK1P53667 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LIMK1P53667 RNA5SP175-201ENST00000364275 119 ntBASIC4.17□□□□□ -1.74
LIMK1P53667 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
LIMK1P53667 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
LIMK1P53667 NDUFB4P4-201ENST00000404822 243 ntBASIC4.17□□□□□ -1.74
LIMK1P53667 RNA5SP104-201ENST00000410989 118 ntBASIC4.17□□□□□ -1.74
LIMK1P53667 VN1R51P-201ENST00000411675 945 ntBASIC4.17□□□□□ -1.74
LIMK1P53667 OSTCP5-201ENST00000425293 453 ntBASIC4.17□□□□□ -1.74
LIMK1P53667 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.17□□□□□ -1.74
LIMK1P53667 MTCYBP32-201ENST00000427945 1084 ntBASIC4.17□□□□□ -1.74
LIMK1P53667 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.17□□□□□ -1.74
LIMK1P53667 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.17□□□□□ -1.74
LIMK1P53667 MTCO1P53-201ENST00000441633 699 ntBASIC4.17□□□□□ -1.74
LIMK1P53667 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.17□□□□□ -1.74
LIMK1P53667 RPS15AP1-201ENST00000457423 391 ntBASIC4.17□□□□□ -1.74
LIMK1P53667 AC104164.3-201ENST00000467363 1258 ntBASIC4.17□□□□□ -1.74
LIMK1P53667 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.17□□□□□ -1.74
LIMK1P53667 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.17□□□□□ -1.74
LIMK1P53667 ATP1B1P1-201ENST00000509767 915 ntBASIC4.17□□□□□ -1.74
LIMK1P53667 AC048346.1-201ENST00000510247 144 ntBASIC4.17□□□□□ -1.74
LIMK1P53667 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.17□□□□□ -1.74
LIMK1P53667 IGKV2D-23-201ENST00000518179 286 ntBASIC4.17□□□□□ -1.74
LIMK1P53667 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.17□□□□□ -1.74
LIMK1P53667 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.17□□□□□ -1.74
LIMK1P53667 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.17□□□□□ -1.74
LIMK1P53667 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LIMK1P53667 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.17□□□□□ -1.74
LIMK1P53667 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.17□□□□□ -1.74
LIMK1P53667 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.17□□□□□ -1.74
LIMK1P53667 PART1_2.1-201ENST00000612397 250 ntBASIC4.17□□□□□ -1.74
LIMK1P53667 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
LIMK1P53667 AL354798.1-201ENST00000622505 329 ntBASIC4.17□□□□□ -1.74
LIMK1P53667 AL445363.3-201ENST00000623080 671 ntBASIC4.17□□□□□ -1.74
LIMK1P53667 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.17□□□□□ -1.74
LIMK1P53667 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
LIMK1P53667 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.17□□□□□ -1.74
LIMK1P53667 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.17□□□□□ -1.74
LIMK1P53667 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
LIMK1P53667 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.17□□□□□ -1.74
LIMK1P53667 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LIMK1P53667 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LIMK1P53667 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LIMK1P53667 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.16□□□□□ -1.74
LIMK1P53667 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LIMK1P53667 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
LIMK1P53667 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
LIMK1P53667 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.16□□□□□ -1.74
LIMK1P53667 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
LIMK1P53667 RNU6-444P-201ENST00000383988 108 ntBASIC4.16□□□□□ -1.74
LIMK1P53667 HSPE1P26-201ENST00000405341 275 ntBASIC4.16□□□□□ -1.74
LIMK1P53667 RNU6-575P-201ENST00000411326 105 ntBASIC4.16□□□□□ -1.74
LIMK1P53667 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.16□□□□□ -1.74
LIMK1P53667 UBTFL3-201ENST00000418934 1024 ntBASIC4.16□□□□□ -1.74
LIMK1P53667 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.16□□□□□ -1.74
LIMK1P53667 RPL36P19-201ENST00000430744 301 ntBASIC4.16□□□□□ -1.74
LIMK1P53667 GTF2IP3-201ENST00000433887 494 ntBASIC4.16□□□□□ -1.74
LIMK1P53667 RPL21P112-201ENST00000434403 463 ntBASIC4.16□□□□□ -1.74
LIMK1P53667 HLA-N-201ENST00000437516 135 ntBASIC4.16□□□□□ -1.74
LIMK1P53667 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.16□□□□□ -1.74
LIMK1P53667 NPM1P49-201ENST00000448027 714 ntBASIC4.16□□□□□ -1.74
LIMK1P53667 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.16□□□□□ -1.74
LIMK1P53667 MRPL42P4-201ENST00000453267 443 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms