Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AL513533.1-201ENST00000453728 415 ntBASIC4.71□□□□□ -1.66
COPB1P53618 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.71□□□□□ -1.66
COPB1P53618 RPL21P126-201ENST00000470049 478 ntBASIC4.71□□□□□ -1.66
COPB1P53618 RN7SL585P-201ENST00000470538 280 ntBASIC4.71□□□□□ -1.66
COPB1P53618 AC104689.1-201ENST00000473356 768 ntBASIC4.71□□□□□ -1.66
COPB1P53618 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.71□□□□□ -1.66
COPB1P53618 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COPB1P53618 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.71□□□□□ -1.66
COPB1P53618 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COPB1P53618 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
COPB1P53618 AC008494.2-201ENST00000514544 370 ntBASIC4.71□□□□□ -1.66
COPB1P53618 RNU6-885P-201ENST00000516607 104 ntBASIC4.71□□□□□ -1.66
COPB1P53618 RN7SKP283-201ENST00000517197 270 ntBASIC4.71□□□□□ -1.66
COPB1P53618 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.71□□□□□ -1.66
COPB1P53618 AC008562.1-201ENST00000521763 330 ntBASIC4.71□□□□□ -1.66
COPB1P53618 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.71□□□□□ -1.66
COPB1P53618 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.71□□□□□ -1.66
COPB1P53618 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.71□□□□□ -1.66
COPB1P53618 TOMM20P2-201ENST00000540082 421 ntBASIC4.71□□□□□ -1.66
COPB1P53618 AC006064.5-201ENST00000541782 248 ntBASIC4.71□□□□□ -1.66
COPB1P53618 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.71□□□□□ -1.66
COPB1P53618 AL391156.1-201ENST00000554965 554 ntBASIC4.71□□□□□ -1.66
COPB1P53618 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.71□□□□□ -1.66
COPB1P53618 AC073544.2-201ENST00000601155 540 ntBASIC4.71□□□□□ -1.66
COPB1P53618 AL139395.1-201ENST00000603662 160 ntBASIC4.71□□□□□ -1.66
COPB1P53618 AC115286.1-201ENST00000604298 434 ntBASIC4.71□□□□□ -1.66
COPB1P53618 AL390816.3-201ENST00000604527 1066 ntBASIC4.71□□□□□ -1.66
COPB1P53618 AC004492.1-201ENST00000607036 742 ntBASIC4.71□□□□□ -1.66
COPB1P53618 LINC00901.1-201ENST00000617252 152 ntBASIC4.71□□□□□ -1.66
COPB1P53618 AC008785.1-201ENST00000624475 456 ntBASIC4.71□□□□□ -1.66
COPB1P53618 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COPB1P53618 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
COPB1P53618 AC006971.1-201ENST00000407916 4486 ntBASIC4.71□□□□□ -1.66
COPB1P53618 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COPB1P53618 AC027290.2-201ENST00000623210 18662 ntBASIC4.71□□□□□ -1.66
COPB1P53618 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.71□□□□□ -1.66
COPB1P53618 MFSD8-242ENST00000641690 4199 ntBASIC4.71□□□□□ -1.66
COPB1P53618 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.71□□□□□ -1.66
COPB1P53618 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
COPB1P53618 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
COPB1P53618 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
COPB1P53618 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COPB1P53618 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COPB1P53618 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COPB1P53618 RNU6-582P-201ENST00000362989 107 ntBASIC4.7□□□□□ -1.66
COPB1P53618 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.7□□□□□ -1.66
COPB1P53618 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COPB1P53618 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
COPB1P53618 SUGT1P1-201ENST00000379514 476 ntBASIC4.7□□□□□ -1.66
COPB1P53618 SNORA51.12-201ENST00000384448 134 ntBASIC4.7□□□□□ -1.66
COPB1P53618 Y_RNA.553-201ENST00000384670 102 ntBASIC4.7□□□□□ -1.66
COPB1P53618 AL583835.1-201ENST00000399570 407 ntBASIC4.7□□□□□ -1.66
COPB1P53618 RPS3AP23-201ENST00000401762 784 ntBASIC4.7□□□□□ -1.66
COPB1P53618 RNA5SP104-201ENST00000410989 118 ntBASIC4.7□□□□□ -1.66
COPB1P53618 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.7□□□□□ -1.66
COPB1P53618 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.7□□□□□ -1.66
COPB1P53618 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.7□□□□□ -1.66
COPB1P53618 TMSB10P2-201ENST00000416049 131 ntBASIC4.7□□□□□ -1.66
COPB1P53618 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.7□□□□□ -1.66
COPB1P53618 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.7□□□□□ -1.66
COPB1P53618 RPS25P9-201ENST00000435591 252 ntBASIC4.7□□□□□ -1.66
COPB1P53618 AL353748.1-201ENST00000440753 474 ntBASIC4.7□□□□□ -1.66
COPB1P53618 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.7□□□□□ -1.66
COPB1P53618 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.7□□□□□ -1.66
COPB1P53618 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.7□□□□□ -1.66
COPB1P53618 AP000936.2-201ENST00000447151 681 ntBASIC4.7□□□□□ -1.66
COPB1P53618 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.7□□□□□ -1.66
COPB1P53618 RPL10P17-201ENST00000453852 316 ntBASIC4.7□□□□□ -1.66
COPB1P53618 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.7□□□□□ -1.66
COPB1P53618 AC005229.2-201ENST00000456995 399 ntBASIC4.7□□□□□ -1.66
COPB1P53618 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.7□□□□□ -1.66
COPB1P53618 AC011352.3-201ENST00000505162 593 ntBASIC4.7□□□□□ -1.66
COPB1P53618 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.7□□□□□ -1.66
COPB1P53618 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.7□□□□□ -1.66
COPB1P53618 AC017037.1-201ENST00000508460 471 ntBASIC4.7□□□□□ -1.66
COPB1P53618 AL117351.2-201ENST00000513571 157 ntBASIC4.7□□□□□ -1.66
COPB1P53618 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.7□□□□□ -1.66
COPB1P53618 AC106038.2-201ENST00000520706 568 ntBASIC4.7□□□□□ -1.66
COPB1P53618 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.7□□□□□ -1.66
COPB1P53618 AC084783.1-201ENST00000565846 910 ntBASIC4.7□□□□□ -1.66
COPB1P53618 AGGF1P4-201ENST00000568249 801 ntBASIC4.7□□□□□ -1.66
COPB1P53618 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.7□□□□□ -1.66
COPB1P53618 ROCK1P1-201ENST00000573767 549 ntBASIC4.7□□□□□ -1.66
COPB1P53618 AC012603.1-201ENST00000606424 528 ntBASIC4.7□□□□□ -1.66
COPB1P53618 AC005962.2-201ENST00000611427 652 ntBASIC4.7□□□□□ -1.66
COPB1P53618 AC124312.6-202ENST00000623624 418 ntBASIC4.7□□□□□ -1.66
COPB1P53618 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.7□□□□□ -1.66
COPB1P53618 AC092656.1-203ENST00000624134 423 ntBASIC4.7□□□□□ -1.66
COPB1P53618 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.7□□□□□ -1.66
COPB1P53618 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COPB1P53618 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
COPB1P53618 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
COPB1P53618 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
COPB1P53618 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.7□□□□□ -1.66
COPB1P53618 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
COPB1P53618 AL133243.3-201ENST00000617415 3004 ntBASIC4.7□□□□□ -1.66
COPB1P53618 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COPB1P53618 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.69□□□□□ -1.66
COPB1P53618 AL450326.2-201ENST00000421913 1962 ntBASIC4.69□□□□□ -1.66
COPB1P53618 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms