Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 AL513175.2-201ENST00000422071 443 ntBASIC3.42□□□□□ -1.86
ATRXP46100 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.42□□□□□ -1.86
ATRXP46100 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.42□□□□□ -1.86
ATRXP46100 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ATRXP46100 SETD6P1-201ENST00000444575 317 ntBASIC3.42□□□□□ -1.86
ATRXP46100 EXOSC3P1-201ENST00000448649 500 ntBASIC3.42□□□□□ -1.86
ATRXP46100 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.42□□□□□ -1.86
ATRXP46100 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.42□□□□□ -1.86
ATRXP46100 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.42□□□□□ -1.86
ATRXP46100 RNA5SP164-201ENST00000516533 110 ntBASIC3.42□□□□□ -1.86
ATRXP46100 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.42□□□□□ -1.86
ATRXP46100 OR4U1P-201ENST00000554958 912 ntBASIC3.42□□□□□ -1.86
ATRXP46100 AC090888.2-201ENST00000559765 1144 ntBASIC3.42□□□□□ -1.86
ATRXP46100 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.42□□□□□ -1.86
ATRXP46100 AC104662.1-201ENST00000604448 511 ntBASIC3.42□□□□□ -1.86
ATRXP46100 AC016727.1-205ENST00000605437 569 ntBASIC3.42□□□□□ -1.86
ATRXP46100 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.42□□□□□ -1.86
ATRXP46100 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ATRXP46100 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC3.42□□□□□ -1.86
ATRXP46100 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
ATRXP46100 MFSD8-213ENST00000641134 1327 ntBASIC3.42□□□□□ -1.86
ATRXP46100 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
ATRXP46100 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ATRXP46100 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ATRXP46100 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ATRXP46100 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.41□□□□□ -1.86
ATRXP46100 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
ATRXP46100 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
ATRXP46100 OTUD4P1-201ENST00000237841 3067 ntBASIC3.41□□□□□ -1.86
ATRXP46100 CR382285.2-201ENST00000624662 1495 ntBASIC3.41□□□□□ -1.86
ATRXP46100 AL513185.3-201ENST00000433335 1300 ntBASIC3.41□□□□□ -1.86
ATRXP46100 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC3.41□□□□□ -1.86
ATRXP46100 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ATRXP46100 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
ATRXP46100 UBTFL3-201ENST00000418934 1024 ntBASIC3.41□□□□□ -1.86
ATRXP46100 USP9YP21-201ENST00000420603 432 ntBASIC3.41□□□□□ -1.86
ATRXP46100 AL139281.1-201ENST00000422120 335 ntBASIC3.41□□□□□ -1.86
ATRXP46100 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.41□□□□□ -1.86
ATRXP46100 AC068135.1-201ENST00000446164 246 ntBASIC3.41□□□□□ -1.86
ATRXP46100 RPL21P18-201ENST00000469899 480 ntBASIC3.41□□□□□ -1.86
ATRXP46100 UBTFL6-201ENST00000477929 1024 ntBASIC3.41□□□□□ -1.86
ATRXP46100 AC067904.2-201ENST00000517322 1283 ntBASIC3.41□□□□□ -1.86
ATRXP46100 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.41□□□□□ -1.86
ATRXP46100 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.41□□□□□ -1.86
ATRXP46100 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.41□□□□□ -1.86
ATRXP46100 AC079171.1-201ENST00000568788 914 ntBASIC3.41□□□□□ -1.86
ATRXP46100 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
ATRXP46100 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.41□□□□□ -1.86
ATRXP46100 AL353778.1-201ENST00000603149 408 ntBASIC3.41□□□□□ -1.86
ATRXP46100 AC013470.4-201ENST00000619978 986 ntBASIC3.41□□□□□ -1.86
ATRXP46100 MAPK10-372ENST00000641954 3413 ntBASIC3.41□□□□□ -1.86
ATRXP46100 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
ATRXP46100 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ATRXP46100 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.41□□□□□ -1.86
ATRXP46100 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
ATRXP46100 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
ATRXP46100 SNORD116-12-201ENST00000384468 92 ntBASIC3.41□□□□□ -1.86
ATRXP46100 AC096533.1-201ENST00000411645 353 ntBASIC3.41□□□□□ -1.86
ATRXP46100 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.41□□□□□ -1.86
ATRXP46100 RAB9AP5-201ENST00000437794 597 ntBASIC3.41□□□□□ -1.86
ATRXP46100 RAB9AP2-201ENST00000443911 597 ntBASIC3.41□□□□□ -1.86
ATRXP46100 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC3.41□□□□□ -1.86
ATRXP46100 AC128713.1-201ENST00000471495 306 ntBASIC3.41□□□□□ -1.86
ATRXP46100 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.41□□□□□ -1.86
ATRXP46100 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.41□□□□□ -1.86
ATRXP46100 AL356057.1-201ENST00000533798 831 ntBASIC3.41□□□□□ -1.86
ATRXP46100 AC107952.2-201ENST00000606048 486 ntBASIC3.41□□□□□ -1.86
ATRXP46100 AC025754.2-201ENST00000606491 432 ntBASIC3.41□□□□□ -1.86
ATRXP46100 AC120053.1-201ENST00000607706 736 ntBASIC3.41□□□□□ -1.86
ATRXP46100 AC079395.3-201ENST00000615161 484 ntBASIC3.41□□□□□ -1.86
ATRXP46100 AC078880.5-201ENST00000617845 421 ntBASIC3.41□□□□□ -1.86
ATRXP46100 AC084824.4-201ENST00000620106 731 ntBASIC3.41□□□□□ -1.86
ATRXP46100 AC019226.2-201ENST00000625973 424 ntBASIC3.41□□□□□ -1.86
ATRXP46100 FRG1DP-201ENST00000635586 771 ntBASIC3.41□□□□□ -1.86
ATRXP46100 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
ATRXP46100 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
ATRXP46100 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
ATRXP46100 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
ATRXP46100 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.4□□□□□ -1.86
ATRXP46100 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.4□□□□□ -1.87
ATRXP46100 RNU6-482P-201ENST00000391068 107 ntBASIC3.4□□□□□ -1.87
ATRXP46100 SNORD65-201ENST00000391079 73 ntBASIC3.4□□□□□ -1.87
ATRXP46100 GSTA8P-201ENST00000404253 637 ntBASIC3.4□□□□□ -1.87
ATRXP46100 PGBD4P8-201ENST00000412993 562 ntBASIC3.4□□□□□ -1.87
ATRXP46100 MTND4LP21-201ENST00000415303 295 ntBASIC3.4□□□□□ -1.87
ATRXP46100 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.4□□□□□ -1.87
ATRXP46100 PTP4A1P7-201ENST00000423476 514 ntBASIC3.4□□□□□ -1.87
ATRXP46100 AL593851.1-201ENST00000426171 157 ntBASIC3.4□□□□□ -1.87
ATRXP46100 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.4□□□□□ -1.87
ATRXP46100 MTCYBP29-201ENST00000436327 1006 ntBASIC3.4□□□□□ -1.87
ATRXP46100 RPS26P2-201ENST00000440331 348 ntBASIC3.4□□□□□ -1.87
ATRXP46100 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.4□□□□□ -1.87
ATRXP46100 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.4□□□□□ -1.87
ATRXP46100 S100A11P1-201ENST00000477525 312 ntBASIC3.4□□□□□ -1.87
ATRXP46100 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.4□□□□□ -1.87
ATRXP46100 AC010376.1-201ENST00000522101 334 ntBASIC3.4□□□□□ -1.87
ATRXP46100 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.4□□□□□ -1.87
ATRXP46100 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
ATRXP46100 DUXAP6-201ENST00000553858 601 ntBASIC3.4□□□□□ -1.87
ATRXP46100 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms