Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.63□□□□□ -1.83
NKX2-1P43699 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.63□□□□□ -1.83
NKX2-1P43699 ATG4AP1-201ENST00000416893 538 ntBASIC3.63□□□□□ -1.83
NKX2-1P43699 AC009518.2-201ENST00000418056 731 ntBASIC3.63□□□□□ -1.83
NKX2-1P43699 AC140479.3-201ENST00000418944 1126 ntBASIC3.63□□□□□ -1.83
NKX2-1P43699 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.63□□□□□ -1.83
NKX2-1P43699 CKS1BP5-201ENST00000434172 273 ntBASIC3.63□□□□□ -1.83
NKX2-1P43699 AL627308.1-201ENST00000435693 821 ntBASIC3.63□□□□□ -1.83
NKX2-1P43699 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.63□□□□□ -1.83
NKX2-1P43699 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.63□□□□□ -1.83
NKX2-1P43699 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.63□□□□□ -1.83
NKX2-1P43699 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.63□□□□□ -1.83
NKX2-1P43699 AC112498.1-201ENST00000444401 332 ntBASIC3.63□□□□□ -1.83
NKX2-1P43699 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.63□□□□□ -1.83
NKX2-1P43699 RPL39P6-201ENST00000448289 150 ntBASIC3.63□□□□□ -1.83
NKX2-1P43699 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.63□□□□□ -1.83
NKX2-1P43699 RPL26P28-201ENST00000451325 435 ntBASIC3.63□□□□□ -1.83
NKX2-1P43699 USP9YP10-201ENST00000454868 628 ntBASIC3.63□□□□□ -1.83
NKX2-1P43699 SCARNA10-201ENST00000459255 330 ntBASIC3.63□□□□□ -1.83
NKX2-1P43699 PABPC1P3-201ENST00000469174 459 ntBASIC3.63□□□□□ -1.83
NKX2-1P43699 RPL30P6-201ENST00000475925 342 ntBASIC3.63□□□□□ -1.83
NKX2-1P43699 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC3.63□□□□□ -1.83
NKX2-1P43699 AC147055.4-201ENST00000504399 745 ntBASIC3.63□□□□□ -1.83
NKX2-1P43699 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.63□□□□□ -1.83
NKX2-1P43699 RPF2P2-201ENST00000504693 896 ntBASIC3.63□□□□□ -1.83
NKX2-1P43699 AC112198.1-201ENST00000505369 1220 ntBASIC3.63□□□□□ -1.83
NKX2-1P43699 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC3.63□□□□□ -1.83
NKX2-1P43699 USP9YP5-201ENST00000511770 630 ntBASIC3.63□□□□□ -1.83
NKX2-1P43699 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
NKX2-1P43699 AC005798.1-201ENST00000513715 387 ntBASIC3.63□□□□□ -1.83
NKX2-1P43699 RNU6-583P-201ENST00000516012 92 ntBASIC3.63□□□□□ -1.83
NKX2-1P43699 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.63□□□□□ -1.83
NKX2-1P43699 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NKX2-1P43699 EDDM3DP-201ENST00000554692 434 ntBASIC3.63□□□□□ -1.83
NKX2-1P43699 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.63□□□□□ -1.83
NKX2-1P43699 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC3.63□□□□□ -1.83
NKX2-1P43699 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.63□□□□□ -1.83
NKX2-1P43699 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NKX2-1P43699 AL133507.1-201ENST00000605269 557 ntBASIC3.63□□□□□ -1.83
NKX2-1P43699 MIR432-201ENST00000606207 94 ntBASIC3.63□□□□□ -1.83
NKX2-1P43699 AC064807.4-201ENST00000607201 407 ntBASIC3.63□□□□□ -1.83
NKX2-1P43699 AC080013.4-201ENST00000607624 649 ntBASIC3.63□□□□□ -1.83
NKX2-1P43699 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.63□□□□□ -1.83
NKX2-1P43699 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.63□□□□□ -1.83
NKX2-1P43699 AC005962.2-201ENST00000611427 652 ntBASIC3.63□□□□□ -1.83
NKX2-1P43699 AC009090.3-201ENST00000616553 565 ntBASIC3.63□□□□□ -1.83
NKX2-1P43699 U73479.1-201ENST00000618062 168 ntBASIC3.63□□□□□ -1.83
NKX2-1P43699 AC092650.2-201ENST00000619984 902 ntBASIC3.63□□□□□ -1.83
NKX2-1P43699 AL049536.1-201ENST00000625043 744 ntBASIC3.63□□□□□ -1.83
NKX2-1P43699 AL355480.1-201ENST00000629041 99 ntBASIC3.63□□□□□ -1.83
NKX2-1P43699 CYP3A51P-201ENST00000633513 256 ntBASIC3.63□□□□□ -1.83
NKX2-1P43699 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
NKX2-1P43699 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
NKX2-1P43699 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NKX2-1P43699 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
NKX2-1P43699 SAMMSON-226ENST00000642089 1582 ntBASIC3.63□□□□□ -1.83
NKX2-1P43699 AP000526.1-201ENST00000603308 1388 ntBASIC3.63□□□□□ -1.83
NKX2-1P43699 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NKX2-1P43699 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NKX2-1P43699 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.62□□□□□ -1.83
NKX2-1P43699 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.62□□□□□ -1.83
NKX2-1P43699 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.62□□□□□ -1.83
NKX2-1P43699 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
NKX2-1P43699 FAM3C2-201ENST00000312214 681 ntBASIC3.62□□□□□ -1.83
NKX2-1P43699 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NKX2-1P43699 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NKX2-1P43699 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
NKX2-1P43699 EIF5P1-201ENST00000400019 1231 ntBASIC3.62□□□□□ -1.83
NKX2-1P43699 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NKX2-1P43699 SKINT1L-201ENST00000401057 817 ntBASIC3.62□□□□□ -1.83
NKX2-1P43699 MTND4LP20-201ENST00000402379 270 ntBASIC3.62□□□□□ -1.83
NKX2-1P43699 HMGB1P17-201ENST00000403495 628 ntBASIC3.62□□□□□ -1.83
NKX2-1P43699 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.62□□□□□ -1.83
NKX2-1P43699 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.62□□□□□ -1.83
NKX2-1P43699 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.62□□□□□ -1.83
NKX2-1P43699 P2RY10P2-201ENST00000416730 913 ntBASIC3.62□□□□□ -1.83
NKX2-1P43699 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.62□□□□□ -1.83
NKX2-1P43699 AL593851.1-201ENST00000426171 157 ntBASIC3.62□□□□□ -1.83
NKX2-1P43699 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NKX2-1P43699 AL035407.1-201ENST00000429211 571 ntBASIC3.62□□□□□ -1.83
NKX2-1P43699 OR2B7P-201ENST00000429302 934 ntBASIC3.62□□□□□ -1.83
NKX2-1P43699 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC3.62□□□□□ -1.83
NKX2-1P43699 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.62□□□□□ -1.83
NKX2-1P43699 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.62□□□□□ -1.83
NKX2-1P43699 AL354941.1-201ENST00000438600 464 ntBASIC3.62□□□□□ -1.83
NKX2-1P43699 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.62□□□□□ -1.83
NKX2-1P43699 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.62□□□□□ -1.83
NKX2-1P43699 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.62□□□□□ -1.83
NKX2-1P43699 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.62□□□□□ -1.83
NKX2-1P43699 RPL12P26-201ENST00000452430 487 ntBASIC3.62□□□□□ -1.83
NKX2-1P43699 AC018638.3-201ENST00000461273 132 ntBASIC3.62□□□□□ -1.83
NKX2-1P43699 S100A11P1-201ENST00000477525 312 ntBASIC3.62□□□□□ -1.83
NKX2-1P43699 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.62□□□□□ -1.83
NKX2-1P43699 RPS6P4-201ENST00000494693 758 ntBASIC3.62□□□□□ -1.83
NKX2-1P43699 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.62□□□□□ -1.83
NKX2-1P43699 SCARNA22-201ENST00000503991 125 ntBASIC3.62□□□□□ -1.83
NKX2-1P43699 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC3.62□□□□□ -1.83
NKX2-1P43699 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.62□□□□□ -1.83
NKX2-1P43699 AC139783.2-201ENST00000504847 1145 ntBASIC3.62□□□□□ -1.83
NKX2-1P43699 XKRY-201ENST00000510392 1100 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms