Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.05□□□□□ -1.76
HNF4AP41235 AL359715.5-201ENST00000623431 443 ntBASIC4.05□□□□□ -1.76
HNF4AP41235 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HNF4AP41235 AC097655.1-201ENST00000635075 318 ntBASIC4.05□□□□□ -1.76
HNF4AP41235 OR6C71P-202ENST00000641886 1107 ntBASIC4.05□□□□□ -1.76
HNF4AP41235 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.05□□□□□ -1.76
HNF4AP41235 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.05□□□□□ -1.76
HNF4AP41235 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.05□□□□□ -1.76
HNF4AP41235 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HNF4AP41235 AC018555.1-201ENST00000567548 1980 ntBASIC4.05□□□□□ -1.76
HNF4AP41235 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
HNF4AP41235 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
HNF4AP41235 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HNF4AP41235 AC116096.1-201ENST00000566804 2314 ntBASIC4.04□□□□□ -1.76
HNF4AP41235 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
HNF4AP41235 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.04□□□□□ -1.76
HNF4AP41235 RNU6-263P-201ENST00000363811 107 ntBASIC4.04□□□□□ -1.76
HNF4AP41235 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HNF4AP41235 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.04□□□□□ -1.76
HNF4AP41235 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.04□□□□□ -1.76
HNF4AP41235 RPL23AP38-201ENST00000423801 469 ntBASIC4.04□□□□□ -1.76
HNF4AP41235 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.04□□□□□ -1.76
HNF4AP41235 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.04□□□□□ -1.76
HNF4AP41235 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.04□□□□□ -1.76
HNF4AP41235 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.04□□□□□ -1.76
HNF4AP41235 AL356276.2-201ENST00000435919 558 ntBASIC4.04□□□□□ -1.76
HNF4AP41235 PPIAP17-201ENST00000438507 471 ntBASIC4.04□□□□□ -1.76
HNF4AP41235 NDUFA5P7-201ENST00000452914 242 ntBASIC4.04□□□□□ -1.76
HNF4AP41235 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.04□□□□□ -1.76
HNF4AP41235 RPL36AP13-201ENST00000457490 317 ntBASIC4.04□□□□□ -1.76
HNF4AP41235 VN1R17P-201ENST00000472048 1090 ntBASIC4.04□□□□□ -1.76
HNF4AP41235 RPS4XP13-201ENST00000483219 789 ntBASIC4.04□□□□□ -1.76
HNF4AP41235 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.04□□□□□ -1.76
HNF4AP41235 AC108475.1-201ENST00000507880 950 ntBASIC4.04□□□□□ -1.76
HNF4AP41235 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
HNF4AP41235 MTCO3P44-201ENST00000510977 541 ntBASIC4.04□□□□□ -1.76
HNF4AP41235 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.04□□□□□ -1.76
HNF4AP41235 IGKV2D-23-201ENST00000518179 286 ntBASIC4.04□□□□□ -1.76
HNF4AP41235 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.04□□□□□ -1.76
HNF4AP41235 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.04□□□□□ -1.76
HNF4AP41235 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.04□□□□□ -1.76
HNF4AP41235 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.04□□□□□ -1.76
HNF4AP41235 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
HNF4AP41235 AC091515.1-201ENST00000548110 679 ntBASIC4.04□□□□□ -1.76
HNF4AP41235 CYB5AP5-201ENST00000549779 389 ntBASIC4.04□□□□□ -1.76
HNF4AP41235 AC107016.1-201ENST00000550463 337 ntBASIC4.04□□□□□ -1.76
HNF4AP41235 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.04□□□□□ -1.76
HNF4AP41235 AC009101.1-201ENST00000568135 242 ntBASIC4.04□□□□□ -1.76
HNF4AP41235 AC012182.1-201ENST00000570133 895 ntBASIC4.04□□□□□ -1.76
HNF4AP41235 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.04□□□□□ -1.76
HNF4AP41235 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.04□□□□□ -1.76
HNF4AP41235 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HNF4AP41235 MIR3690-201ENST00000580266 75 ntBASIC4.04□□□□□ -1.76
HNF4AP41235 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.04□□□□□ -1.76
HNF4AP41235 MIR3138-201ENST00000585238 82 ntBASIC4.04□□□□□ -1.76
HNF4AP41235 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.04□□□□□ -1.76
HNF4AP41235 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC4.04□□□□□ -1.76
HNF4AP41235 RPP40P2-201ENST00000603596 712 ntBASIC4.04□□□□□ -1.76
HNF4AP41235 AL357094.1-201ENST00000603845 844 ntBASIC4.04□□□□□ -1.76
HNF4AP41235 AC090425.2-201ENST00000608818 501 ntBASIC4.04□□□□□ -1.76
HNF4AP41235 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.04□□□□□ -1.76
HNF4AP41235 AL157392.4-201ENST00000609756 345 ntBASIC4.04□□□□□ -1.76
HNF4AP41235 AC090116.1-201ENST00000615679 446 ntBASIC4.04□□□□□ -1.76
HNF4AP41235 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.04□□□□□ -1.76
HNF4AP41235 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.04□□□□□ -1.76
HNF4AP41235 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
HNF4AP41235 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HNF4AP41235 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HNF4AP41235 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.04□□□□□ -1.76
HNF4AP41235 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
HNF4AP41235 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HNF4AP41235 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
HNF4AP41235 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
HNF4AP41235 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HNF4AP41235 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
HNF4AP41235 MIR383-201ENST00000362257 73 ntBASIC4.03□□□□□ -1.76
HNF4AP41235 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.03□□□□□ -1.76
HNF4AP41235 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HNF4AP41235 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HNF4AP41235 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HNF4AP41235 AL139098.1-201ENST00000407291 389 ntBASIC4.03□□□□□ -1.76
HNF4AP41235 AL023807.1-201ENST00000407932 359 ntBASIC4.03□□□□□ -1.76
HNF4AP41235 RNU2-71P-201ENST00000411395 189 ntBASIC4.03□□□□□ -1.76
HNF4AP41235 TOMM22P1-201ENST00000418578 312 ntBASIC4.03□□□□□ -1.76
HNF4AP41235 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.03□□□□□ -1.76
HNF4AP41235 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HNF4AP41235 C4BPAP2-201ENST00000428434 478 ntBASIC4.03□□□□□ -1.76
HNF4AP41235 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HNF4AP41235 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.03□□□□□ -1.76
HNF4AP41235 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HNF4AP41235 HMGB1P12-201ENST00000438594 598 ntBASIC4.03□□□□□ -1.76
HNF4AP41235 AC000041.1-201ENST00000439655 175 ntBASIC4.03□□□□□ -1.76
HNF4AP41235 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.03□□□□□ -1.76
HNF4AP41235 H2AFZP6-201ENST00000444403 394 ntBASIC4.03□□□□□ -1.76
HNF4AP41235 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.03□□□□□ -1.76
HNF4AP41235 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.03□□□□□ -1.76
HNF4AP41235 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.03□□□□□ -1.76
HNF4AP41235 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.03□□□□□ -1.76
HNF4AP41235 AL139824.2-201ENST00000458731 1095 ntBASIC4.03□□□□□ -1.76
HNF4AP41235 AC068587.2-201ENST00000478386 781 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms