Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.52□□□□□ -1.53
CCNFP41002 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.52□□□□□ -1.53
CCNFP41002 MIR3118-1-201ENST00000581787 76 ntBASIC5.52□□□□□ -1.53
CCNFP41002 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.52□□□□□ -1.53
CCNFP41002 AC008966.2-201ENST00000606157 453 ntBASIC5.52□□□□□ -1.53
CCNFP41002 AL391813.2-201ENST00000609113 322 ntBASIC5.52□□□□□ -1.53
CCNFP41002 uc_338.7-201ENST00000621834 124 ntBASIC5.52□□□□□ -1.53
CCNFP41002 AP002505.2-201ENST00000623585 696 ntBASIC5.52□□□□□ -1.53
CCNFP41002 AC091953.2-201ENST00000623979 160 ntBASIC5.52□□□□□ -1.53
CCNFP41002 CYP3A51P-201ENST00000633513 256 ntBASIC5.52□□□□□ -1.53
CCNFP41002 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.52□□□□□ -1.53
CCNFP41002 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.52□□□□□ -1.53
CCNFP41002 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.52□□□□□ -1.53
CCNFP41002 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCNFP41002 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CCNFP41002 ZNF680P1-201ENST00000436625 1469 ntBASIC5.51□□□□□ -1.53
CCNFP41002 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
CCNFP41002 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.51□□□□□ -1.53
CCNFP41002 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CCNFP41002 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCNFP41002 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CCNFP41002 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCNFP41002 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCNFP41002 AC007529.1-201ENST00000418574 2178 ntBASIC5.51□□□□□ -1.53
CCNFP41002 RNY3P3-201ENST00000363816 102 ntBASIC5.51□□□□□ -1.53
CCNFP41002 RNU6-878P-201ENST00000384578 110 ntBASIC5.51□□□□□ -1.53
CCNFP41002 SNORA48.4-201ENST00000391089 134 ntBASIC5.51□□□□□ -1.53
CCNFP41002 AL356057.2-201ENST00000403318 432 ntBASIC5.51□□□□□ -1.53
CCNFP41002 AL009179.1-201ENST00000406085 265 ntBASIC5.51□□□□□ -1.53
CCNFP41002 RNU2-9P-201ENST00000410194 145 ntBASIC5.51□□□□□ -1.53
CCNFP41002 RSU1P3-201ENST00000412878 835 ntBASIC5.51□□□□□ -1.53
CCNFP41002 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.51□□□□□ -1.53
CCNFP41002 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.51□□□□□ -1.53
CCNFP41002 SLC35E1P1-201ENST00000419313 864 ntBASIC5.51□□□□□ -1.53
CCNFP41002 RPS15AP12-201ENST00000419498 388 ntBASIC5.51□□□□□ -1.53
CCNFP41002 RPL31P45-201ENST00000419532 356 ntBASIC5.51□□□□□ -1.53
CCNFP41002 COX6CP15-201ENST00000426313 211 ntBASIC5.51□□□□□ -1.53
CCNFP41002 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCNFP41002 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCNFP41002 AL606489.2-201ENST00000433886 234 ntBASIC5.51□□□□□ -1.53
CCNFP41002 CEACAMP1-201ENST00000434624 1035 ntBASIC5.51□□□□□ -1.53
CCNFP41002 AL353597.2-202ENST00000434901 373 ntBASIC5.51□□□□□ -1.53
CCNFP41002 CYCSP12-201ENST00000437729 300 ntBASIC5.51□□□□□ -1.53
CCNFP41002 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.51□□□□□ -1.53
CCNFP41002 AP000797.2-201ENST00000475768 606 ntBASIC5.51□□□□□ -1.53
CCNFP41002 IGBP1P4-201ENST00000503202 879 ntBASIC5.51□□□□□ -1.53
CCNFP41002 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.51□□□□□ -1.53
CCNFP41002 AC104057.1-201ENST00000515547 497 ntBASIC5.51□□□□□ -1.53
CCNFP41002 RNA5SP228-201ENST00000516232 133 ntBASIC5.51□□□□□ -1.53
CCNFP41002 SCARNA20.4-201ENST00000516969 131 ntBASIC5.51□□□□□ -1.53
CCNFP41002 AP000907.2-201ENST00000530827 353 ntBASIC5.51□□□□□ -1.53
CCNFP41002 AC027369.5-201ENST00000533838 755 ntBASIC5.51□□□□□ -1.53
CCNFP41002 AC024224.1-201ENST00000538284 609 ntBASIC5.51□□□□□ -1.53
CCNFP41002 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC5.51□□□□□ -1.53
CCNFP41002 AC063949.1-201ENST00000552900 865 ntBASIC5.51□□□□□ -1.53
CCNFP41002 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.51□□□□□ -1.53
CCNFP41002 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCNFP41002 RPS3AP23-202ENST00000574601 686 ntBASIC5.51□□□□□ -1.53
CCNFP41002 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.51□□□□□ -1.53
CCNFP41002 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.51□□□□□ -1.53
CCNFP41002 AC015982.1-201ENST00000608113 465 ntBASIC5.51□□□□□ -1.53
CCNFP41002 AC064836.2-201ENST00000609491 462 ntBASIC5.51□□□□□ -1.53
CCNFP41002 RMST_3.1-201ENST00000611651 109 ntBASIC5.51□□□□□ -1.53
CCNFP41002 AP005431.1-201ENST00000618479 319 ntBASIC5.51□□□□□ -1.53
CCNFP41002 AC090527.3-201ENST00000619041 548 ntBASIC5.51□□□□□ -1.53
CCNFP41002 AC006504.8-201ENST00000621046 635 ntBASIC5.51□□□□□ -1.53
CCNFP41002 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCNFP41002 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.51□□□□□ -1.53
CCNFP41002 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCNFP41002 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCNFP41002 AL078621.3-201ENST00000623707 2042 ntBASIC5.51□□□□□ -1.53
CCNFP41002 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCNFP41002 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CCNFP41002 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CCNFP41002 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCNFP41002 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CCNFP41002 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CCNFP41002 AL451142.2-201ENST00000429076 2090 ntBASIC5.51□□□□□ -1.53
CCNFP41002 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.51□□□□□ -1.53
CCNFP41002 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CCNFP41002 ZNF652P1-201ENST00000442420 1309 ntBASIC5.5□□□□□ -1.53
CCNFP41002 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.5□□□□□ -1.53
CCNFP41002 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCNFP41002 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
CCNFP41002 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CCNFP41002 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCNFP41002 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.5□□□□□ -1.53
CCNFP41002 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
CCNFP41002 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
CCNFP41002 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCNFP41002 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCNFP41002 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CCNFP41002 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCNFP41002 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCNFP41002 FRG1BP-201ENST00000278882 761 ntBASIC5.5□□□□□ -1.53
CCNFP41002 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CCNFP41002 RNA5SP46-201ENST00000362370 120 ntBASIC5.5□□□□□ -1.53
CCNFP41002 RN7SKP292-201ENST00000365522 317 ntBASIC5.5□□□□□ -1.53
CCNFP41002 RNU1-39P-201ENST00000383897 165 ntBASIC5.5□□□□□ -1.53
CCNFP41002 RNU6-146P-201ENST00000384602 108 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms