Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HMGCLP35914 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HMGCLP35914 AL590704.1-201ENST00000402856 794 ntBASIC3.68□□□□□ -1.82
HMGCLP35914 MTHFD2P2-201ENST00000407725 247 ntBASIC3.68□□□□□ -1.82
HMGCLP35914 HMGB3P20-201ENST00000417997 600 ntBASIC3.68□□□□□ -1.82
HMGCLP35914 RPL36AP36-201ENST00000418616 301 ntBASIC3.68□□□□□ -1.82
HMGCLP35914 USP9YP21-201ENST00000420603 432 ntBASIC3.68□□□□□ -1.82
HMGCLP35914 AC092017.2-201ENST00000427600 362 ntBASIC3.68□□□□□ -1.82
HMGCLP35914 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
HMGCLP35914 AC007389.2-201ENST00000434630 306 ntBASIC3.68□□□□□ -1.82
HMGCLP35914 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.68□□□□□ -1.82
HMGCLP35914 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.68□□□□□ -1.82
HMGCLP35914 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.68□□□□□ -1.82
HMGCLP35914 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.68□□□□□ -1.82
HMGCLP35914 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.68□□□□□ -1.82
HMGCLP35914 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HMGCLP35914 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.68□□□□□ -1.82
HMGCLP35914 OR51B8P-201ENST00000449892 769 ntBASIC3.68□□□□□ -1.82
HMGCLP35914 MTCO3P20-201ENST00000454926 688 ntBASIC3.68□□□□□ -1.82
HMGCLP35914 HMGB3P30-201ENST00000457863 606 ntBASIC3.68□□□□□ -1.82
HMGCLP35914 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.68□□□□□ -1.82
HMGCLP35914 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.68□□□□□ -1.82
HMGCLP35914 AC020898.1-201ENST00000474167 787 ntBASIC3.68□□□□□ -1.82
HMGCLP35914 RPS4XP6-201ENST00000477670 797 ntBASIC3.68□□□□□ -1.82
HMGCLP35914 AC008427.1-201ENST00000503102 655 ntBASIC3.68□□□□□ -1.82
HMGCLP35914 AC008565.1-201ENST00000509046 885 ntBASIC3.68□□□□□ -1.82
HMGCLP35914 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.68□□□□□ -1.82
HMGCLP35914 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.68□□□□□ -1.82
HMGCLP35914 OR8I1P-201ENST00000529291 931 ntBASIC3.68□□□□□ -1.82
HMGCLP35914 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.68□□□□□ -1.82
HMGCLP35914 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.68□□□□□ -1.82
HMGCLP35914 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.68□□□□□ -1.82
HMGCLP35914 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.68□□□□□ -1.82
HMGCLP35914 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.68□□□□□ -1.82
HMGCLP35914 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.68□□□□□ -1.82
HMGCLP35914 MIR4789-201ENST00000577469 82 ntBASIC3.68□□□□□ -1.82
HMGCLP35914 AC105148.1-201ENST00000604961 409 ntBASIC3.68□□□□□ -1.82
HMGCLP35914 AC099785.1-201ENST00000605697 437 ntBASIC3.68□□□□□ -1.82
HMGCLP35914 AL445984.1-201ENST00000637834 659 ntBASIC3.68□□□□□ -1.82
HMGCLP35914 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HMGCLP35914 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
HMGCLP35914 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.68□□□□□ -1.82
HMGCLP35914 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
HMGCLP35914 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
HMGCLP35914 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.68□□□□□ -1.82
HMGCLP35914 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
HMGCLP35914 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
HMGCLP35914 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HMGCLP35914 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HMGCLP35914 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HMGCLP35914 RNU1-18P-201ENST00000363062 164 ntBASIC3.67□□□□□ -1.82
HMGCLP35914 RNU5B-1-201ENST00000363286 116 ntBASIC3.67□□□□□ -1.82
HMGCLP35914 RNU6-925P-201ENST00000384629 104 ntBASIC3.67□□□□□ -1.82
HMGCLP35914 AC007066.1-201ENST00000392902 381 ntBASIC3.67□□□□□ -1.82
HMGCLP35914 RPL7P60-201ENST00000397636 735 ntBASIC3.67□□□□□ -1.82
HMGCLP35914 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
HMGCLP35914 RN7SKP202-201ENST00000410439 330 ntBASIC3.67□□□□□ -1.82
HMGCLP35914 AC096533.1-201ENST00000411645 353 ntBASIC3.67□□□□□ -1.82
HMGCLP35914 RPL30P2-201ENST00000414021 291 ntBASIC3.67□□□□□ -1.82
HMGCLP35914 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.67□□□□□ -1.82
HMGCLP35914 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HMGCLP35914 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.67□□□□□ -1.82
HMGCLP35914 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.67□□□□□ -1.82
HMGCLP35914 CDC42P1-201ENST00000456658 548 ntBASIC3.67□□□□□ -1.82
HMGCLP35914 AL136097.1-201ENST00000456945 913 ntBASIC3.67□□□□□ -1.82
HMGCLP35914 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.67□□□□□ -1.82
HMGCLP35914 AC104982.1-201ENST00000478775 574 ntBASIC3.67□□□□□ -1.82
HMGCLP35914 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.67□□□□□ -1.82
HMGCLP35914 RN7SKP83-201ENST00000516512 178 ntBASIC3.67□□□□□ -1.82
HMGCLP35914 AC118942.1-201ENST00000529674 1035 ntBASIC3.67□□□□□ -1.82
HMGCLP35914 AC008011.1-201ENST00000545989 227 ntBASIC3.67□□□□□ -1.82
HMGCLP35914 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.67□□□□□ -1.82
HMGCLP35914 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.67□□□□□ -1.82
HMGCLP35914 AC011611.5-201ENST00000552477 578 ntBASIC3.67□□□□□ -1.82
HMGCLP35914 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.67□□□□□ -1.82
HMGCLP35914 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.67□□□□□ -1.82
HMGCLP35914 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.67□□□□□ -1.82
HMGCLP35914 AL020997.2-201ENST00000602607 184 ntBASIC3.67□□□□□ -1.82
HMGCLP35914 AL158050.2-201ENST00000605336 568 ntBASIC3.67□□□□□ -1.82
HMGCLP35914 AL391497.1-201ENST00000608671 547 ntBASIC3.67□□□□□ -1.82
HMGCLP35914 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.67□□□□□ -1.82
HMGCLP35914 AL732618.1-201ENST00000623251 301 ntBASIC3.67□□□□□ -1.82
HMGCLP35914 AP003485.1-201ENST00000625093 753 ntBASIC3.67□□□□□ -1.82
HMGCLP35914 OR4G3P-201ENST00000633500 913 ntBASIC3.67□□□□□ -1.82
HMGCLP35914 AC138649.5-201ENST00000637456 137 ntBASIC3.67□□□□□ -1.82
HMGCLP35914 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.67□□□□□ -1.82
HMGCLP35914 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HMGCLP35914 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
HMGCLP35914 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.67□□□□□ -1.82
HMGCLP35914 MTCO1P6-201ENST00000481192 1384 ntBASIC3.66□□□□□ -1.82
HMGCLP35914 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
HMGCLP35914 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.66□□□□□ -1.82
HMGCLP35914 AC245054.1-201ENST00000420944 258 ntBASIC3.66□□□□□ -1.82
HMGCLP35914 AL445584.1-201ENST00000431451 330 ntBASIC3.66□□□□□ -1.82
HMGCLP35914 KCTD10P1-201ENST00000434203 625 ntBASIC3.66□□□□□ -1.82
HMGCLP35914 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
HMGCLP35914 NDUFB1P1-201ENST00000435191 180 ntBASIC3.66□□□□□ -1.82
HMGCLP35914 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.66□□□□□ -1.82
HMGCLP35914 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.66□□□□□ -1.82
HMGCLP35914 AL359073.1-201ENST00000448036 403 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms