Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.38□□□□□ -1.71
HOXD13P35453 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.38□□□□□ -1.71
HOXD13P35453 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXD13P35453 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXD13P35453 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
HOXD13P35453 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HOXD13P35453 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXD13P35453 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXD13P35453 SNORA40.2-201ENST00000390847 128 ntBASIC4.38□□□□□ -1.71
HOXD13P35453 AL121972.1-201ENST00000402023 252 ntBASIC4.38□□□□□ -1.71
HOXD13P35453 AL136310.1-201ENST00000404926 654 ntBASIC4.38□□□□□ -1.71
HOXD13P35453 RNA5SP239-201ENST00000410218 129 ntBASIC4.38□□□□□ -1.71
HOXD13P35453 RNU2-28P-201ENST00000410457 189 ntBASIC4.38□□□□□ -1.71
HOXD13P35453 AC108032.1-201ENST00000416706 207 ntBASIC4.38□□□□□ -1.71
HOXD13P35453 OFD1P18Y-201ENST00000420889 959 ntBASIC4.38□□□□□ -1.71
HOXD13P35453 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.38□□□□□ -1.71
HOXD13P35453 GTF2IP23-201ENST00000423746 351 ntBASIC4.38□□□□□ -1.71
HOXD13P35453 MTCO2P23-201ENST00000425216 680 ntBASIC4.38□□□□□ -1.71
HOXD13P35453 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.38□□□□□ -1.71
HOXD13P35453 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.38□□□□□ -1.71
HOXD13P35453 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.38□□□□□ -1.71
HOXD13P35453 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.38□□□□□ -1.71
HOXD13P35453 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.38□□□□□ -1.71
HOXD13P35453 AC004854.1-201ENST00000440356 349 ntBASIC4.38□□□□□ -1.71
HOXD13P35453 VN1R25P-201ENST00000443385 738 ntBASIC4.38□□□□□ -1.71
HOXD13P35453 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.38□□□□□ -1.71
HOXD13P35453 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.38□□□□□ -1.71
HOXD13P35453 AL589880.1-201ENST00000448271 287 ntBASIC4.38□□□□□ -1.71
HOXD13P35453 AC104073.1-201ENST00000451988 151 ntBASIC4.38□□□□□ -1.71
HOXD13P35453 TVP23BP2-201ENST00000455082 615 ntBASIC4.38□□□□□ -1.71
HOXD13P35453 VN1R40P-201ENST00000455196 941 ntBASIC4.38□□□□□ -1.71
HOXD13P35453 RPS7P7-201ENST00000463499 571 ntBASIC4.38□□□□□ -1.71
HOXD13P35453 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
HOXD13P35453 AP000926.1-201ENST00000479573 241 ntBASIC4.38□□□□□ -1.71
HOXD13P35453 AL132838.2-201ENST00000492041 314 ntBASIC4.38□□□□□ -1.71
HOXD13P35453 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.38□□□□□ -1.71
HOXD13P35453 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.38□□□□□ -1.71
HOXD13P35453 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.38□□□□□ -1.71
HOXD13P35453 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.38□□□□□ -1.71
HOXD13P35453 RN7SKP116-201ENST00000516902 319 ntBASIC4.38□□□□□ -1.71
HOXD13P35453 NDUFA5P2-201ENST00000519723 344 ntBASIC4.38□□□□□ -1.71
HOXD13P35453 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.38□□□□□ -1.71
HOXD13P35453 AC136624.4-201ENST00000573044 370 ntBASIC4.38□□□□□ -1.71
HOXD13P35453 AC245884.10-201ENST00000597355 337 ntBASIC4.38□□□□□ -1.71
HOXD13P35453 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.38□□□□□ -1.71
HOXD13P35453 AC113368.1-201ENST00000603736 382 ntBASIC4.38□□□□□ -1.71
HOXD13P35453 AL160237.3-201ENST00000604114 1013 ntBASIC4.38□□□□□ -1.71
HOXD13P35453 DPRXP5-201ENST00000604662 539 ntBASIC4.38□□□□□ -1.71
HOXD13P35453 AL157392.4-201ENST00000609756 345 ntBASIC4.38□□□□□ -1.71
HOXD13P35453 AC006338.2-201ENST00000616864 791 ntBASIC4.38□□□□□ -1.71
HOXD13P35453 AL121895.2-201ENST00000619558 447 ntBASIC4.38□□□□□ -1.71
HOXD13P35453 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXD13P35453 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXD13P35453 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.37□□□□□ -1.71
HOXD13P35453 AC130650.2-201ENST00000618736 2403 ntBASIC4.37□□□□□ -1.71
HOXD13P35453 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXD13P35453 MTCO1P14-201ENST00000441695 1559 ntBASIC4.37□□□□□ -1.71
HOXD13P35453 AL359893.1-201ENST00000447628 1580 ntBASIC4.37□□□□□ -1.71
HOXD13P35453 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HOXD13P35453 RNU6-374P-201ENST00000364146 108 ntBASIC4.37□□□□□ -1.71
HOXD13P35453 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXD13P35453 RPS26P8-201ENST00000393490 348 ntBASIC4.37□□□□□ -1.71
HOXD13P35453 RPL23AP47-201ENST00000408017 460 ntBASIC4.37□□□□□ -1.71
HOXD13P35453 RNA5SP104-201ENST00000410989 118 ntBASIC4.37□□□□□ -1.71
HOXD13P35453 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXD13P35453 KRR1P1-201ENST00000419430 803 ntBASIC4.37□□□□□ -1.71
HOXD13P35453 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXD13P35453 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXD13P35453 AL645638.1-201ENST00000440519 361 ntBASIC4.37□□□□□ -1.71
HOXD13P35453 EEF1A1P39-201ENST00000440791 250 ntBASIC4.37□□□□□ -1.71
HOXD13P35453 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXD13P35453 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXD13P35453 ZNF886P-201ENST00000450781 723 ntBASIC4.37□□□□□ -1.71
HOXD13P35453 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXD13P35453 RN7SL860P-201ENST00000473738 223 ntBASIC4.37□□□□□ -1.71
HOXD13P35453 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXD13P35453 RN7SL271P-201ENST00000487601 295 ntBASIC4.37□□□□□ -1.71
HOXD13P35453 GTF2IP9-201ENST00000502460 301 ntBASIC4.37□□□□□ -1.71
HOXD13P35453 AC139783.2-201ENST00000504847 1145 ntBASIC4.37□□□□□ -1.71
HOXD13P35453 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXD13P35453 Vault.1-201ENST00000516474 102 ntBASIC4.37□□□□□ -1.71
HOXD13P35453 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.37□□□□□ -1.71
HOXD13P35453 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXD13P35453 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXD13P35453 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXD13P35453 MTND1P8-201ENST00000571424 950 ntBASIC4.37□□□□□ -1.71
HOXD13P35453 AC107982.3-201ENST00000584957 985 ntBASIC4.37□□□□□ -1.71
HOXD13P35453 MTCO2P2-201ENST00000591258 225 ntBASIC4.37□□□□□ -1.71
HOXD13P35453 AC005255.1-201ENST00000593748 216 ntBASIC4.37□□□□□ -1.71
HOXD13P35453 AC025588.3-201ENST00000604182 274 ntBASIC4.37□□□□□ -1.71
HOXD13P35453 IGHV3-29-201ENST00000604817 344 ntBASIC4.37□□□□□ -1.71
HOXD13P35453 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXD13P35453 AC090912.3-201ENST00000609775 533 ntBASIC4.37□□□□□ -1.71
HOXD13P35453 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXD13P35453 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HOXD13P35453 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXD13P35453 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HOXD13P35453 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HOXD13P35453 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXD13P35453 Y_RNA.25-201ENST00000362528 102 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms