Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 RPL5P13-201ENST00000462840 709 ntBASIC4.28□□□□□ -1.72
USP6P35125 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.28□□□□□ -1.72
USP6P35125 AC113430.1-201ENST00000506872 718 ntBASIC4.28□□□□□ -1.72
USP6P35125 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.28□□□□□ -1.72
USP6P35125 RPL12P22-201ENST00000519073 490 ntBASIC4.28□□□□□ -1.72
USP6P35125 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
USP6P35125 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.28□□□□□ -1.72
USP6P35125 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.28□□□□□ -1.72
USP6P35125 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
USP6P35125 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
USP6P35125 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
USP6P35125 FAM35DP-201ENST00000323387 2712 ntBASIC4.27□□□□□ -1.73
USP6P35125 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
USP6P35125 RLIMP2-201ENST00000427891 1563 ntBASIC4.27□□□□□ -1.73
USP6P35125 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
USP6P35125 RIOK3P1-201ENST00000418778 1528 ntBASIC4.27□□□□□ -1.73
USP6P35125 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.27□□□□□ -1.73
USP6P35125 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
USP6P35125 RNU6-249P-201ENST00000363016 102 ntBASIC4.27□□□□□ -1.73
USP6P35125 SNORD67-201ENST00000390833 111 ntBASIC4.27□□□□□ -1.73
USP6P35125 AL139095.1-201ENST00000404326 391 ntBASIC4.27□□□□□ -1.73
USP6P35125 RPL23AP4-201ENST00000427757 463 ntBASIC4.27□□□□□ -1.73
USP6P35125 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
USP6P35125 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.27□□□□□ -1.73
USP6P35125 Z99127.3-201ENST00000448158 395 ntBASIC4.27□□□□□ -1.73
USP6P35125 AL591623.2-201ENST00000449978 222 ntBASIC4.27□□□□□ -1.73
USP6P35125 S100A11P1-201ENST00000477525 312 ntBASIC4.27□□□□□ -1.73
USP6P35125 AC021146.7-201ENST00000509604 775 ntBASIC4.27□□□□□ -1.73
USP6P35125 AC026801.2-201ENST00000515352 425 ntBASIC4.27□□□□□ -1.73
USP6P35125 MTCYBP19-201ENST00000517463 1124 ntBASIC4.27□□□□□ -1.73
USP6P35125 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
USP6P35125 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.27□□□□□ -1.73
USP6P35125 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.27□□□□□ -1.73
USP6P35125 AL034351.1-201ENST00000605288 668 ntBASIC4.27□□□□□ -1.73
USP6P35125 HPVC1-201ENST00000629899 1198 ntBASIC4.27□□□□□ -1.73
USP6P35125 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
USP6P35125 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
USP6P35125 ZNF90P1-201ENST00000480493 1951 ntBASIC4.26□□□□□ -1.73
USP6P35125 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.26□□□□□ -1.73
USP6P35125 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.26□□□□□ -1.73
USP6P35125 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
USP6P35125 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.26□□□□□ -1.73
USP6P35125 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.26□□□□□ -1.73
USP6P35125 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.26□□□□□ -1.73
USP6P35125 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
USP6P35125 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.26□□□□□ -1.73
USP6P35125 AL606490.7-201ENST00000433136 191 ntBASIC4.26□□□□□ -1.73
USP6P35125 MTCO3P43-201ENST00000440974 771 ntBASIC4.26□□□□□ -1.73
USP6P35125 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
USP6P35125 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.26□□□□□ -1.73
USP6P35125 RPL12P26-201ENST00000452430 487 ntBASIC4.26□□□□□ -1.73
USP6P35125 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC4.26□□□□□ -1.73
USP6P35125 HSPE1P22-201ENST00000456856 327 ntBASIC4.26□□□□□ -1.73
USP6P35125 AC068724.1-201ENST00000487100 792 ntBASIC4.26□□□□□ -1.73
USP6P35125 AC090543.1-201ENST00000492168 485 ntBASIC4.26□□□□□ -1.73
USP6P35125 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
USP6P35125 AC087272.1-201ENST00000523624 533 ntBASIC4.26□□□□□ -1.73
USP6P35125 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.26□□□□□ -1.73
USP6P35125 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
USP6P35125 MIR3945-201ENST00000581853 98 ntBASIC4.26□□□□□ -1.73
USP6P35125 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.26□□□□□ -1.73
USP6P35125 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.26□□□□□ -1.73
USP6P35125 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.26□□□□□ -1.73
USP6P35125 AL008729.2-201ENST00000606393 473 ntBASIC4.26□□□□□ -1.73
USP6P35125 OR2AS2P-201ENST00000606902 342 ntBASIC4.26□□□□□ -1.73
USP6P35125 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
USP6P35125 AL645568.2-201ENST00000432815 1337 ntBASIC4.25□□□□□ -1.73
USP6P35125 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.25□□□□□ -1.73
USP6P35125 RNU6-40P-201ENST00000384254 107 ntBASIC4.25□□□□□ -1.73
USP6P35125 CCNB2P1-201ENST00000399411 1150 ntBASIC4.25□□□□□ -1.73
USP6P35125 MTATP6P19-201ENST00000413797 659 ntBASIC4.25□□□□□ -1.73
USP6P35125 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.25□□□□□ -1.73
USP6P35125 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.25□□□□□ -1.73
USP6P35125 CST9LP2-201ENST00000437612 320 ntBASIC4.25□□□□□ -1.73
USP6P35125 CCDC75P1-201ENST00000469247 791 ntBASIC4.25□□□□□ -1.73
USP6P35125 HMGB1P3-201ENST00000502802 616 ntBASIC4.25□□□□□ -1.73
USP6P35125 AC108157.1-201ENST00000510511 539 ntBASIC4.25□□□□□ -1.73
USP6P35125 AC091826.1-201ENST00000514065 313 ntBASIC4.25□□□□□ -1.73
USP6P35125 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.25□□□□□ -1.73
USP6P35125 RNA5SP356-201ENST00000515972 94 ntBASIC4.25□□□□□ -1.73
USP6P35125 AC009812.2-201ENST00000517657 457 ntBASIC4.25□□□□□ -1.73
USP6P35125 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
USP6P35125 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.25□□□□□ -1.73
USP6P35125 H3F3AP1-201ENST00000559984 334 ntBASIC4.25□□□□□ -1.73
USP6P35125 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.25□□□□□ -1.73
USP6P35125 MIR3162-201ENST00000581818 82 ntBASIC4.25□□□□□ -1.73
USP6P35125 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.25□□□□□ -1.73
USP6P35125 AC084373.1-201ENST00000603311 235 ntBASIC4.25□□□□□ -1.73
USP6P35125 AL355802.4-201ENST00000607635 548 ntBASIC4.25□□□□□ -1.73
USP6P35125 AL163152.1-201ENST00000642001 374 ntBASIC4.25□□□□□ -1.73
USP6P35125 AC110792.3-201ENST00000595906 1614 ntBASIC4.25□□□□□ -1.73
USP6P35125 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.24□□□□□ -1.73
USP6P35125 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
USP6P35125 RANP4-201ENST00000413361 655 ntBASIC4.24□□□□□ -1.73
USP6P35125 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.24□□□□□ -1.73
USP6P35125 AL513175.1-201ENST00000431492 780 ntBASIC4.24□□□□□ -1.73
USP6P35125 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC4.24□□□□□ -1.73
USP6P35125 AL691517.1-201ENST00000440833 1235 ntBASIC4.24□□□□□ -1.73
USP6P35125 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.24□□□□□ -1.73
USP6P35125 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms