Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
SLC6A4P31645 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SLC6A4P31645 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SLC6A4P31645 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.84□□□□□ -1.63
SLC6A4P31645 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SLC6A4P31645 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SLC6A4P31645 RNA5SP332-201ENST00000391063 115 ntBASIC4.84□□□□□ -1.63
SLC6A4P31645 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SLC6A4P31645 GLULP6-201ENST00000399502 913 ntBASIC4.84□□□□□ -1.63
SLC6A4P31645 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SLC6A4P31645 HMGB1P17-201ENST00000403495 628 ntBASIC4.84□□□□□ -1.63
SLC6A4P31645 AL078604.1-201ENST00000404609 466 ntBASIC4.84□□□□□ -1.63
SLC6A4P31645 SNORA11-201ENST00000408789 128 ntBASIC4.84□□□□□ -1.63
SLC6A4P31645 AL133384.1-201ENST00000412744 351 ntBASIC4.84□□□□□ -1.63
SLC6A4P31645 AC109780.2-201ENST00000413467 845 ntBASIC4.84□□□□□ -1.63
SLC6A4P31645 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC6A4P31645 RPS27AP7-201ENST00000422792 455 ntBASIC4.84□□□□□ -1.63
SLC6A4P31645 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC6A4P31645 CKS1BP6-201ENST00000424932 240 ntBASIC4.84□□□□□ -1.63
SLC6A4P31645 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC6A4P31645 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.84□□□□□ -1.63
SLC6A4P31645 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.84□□□□□ -1.63
SLC6A4P31645 RPS26P56-201ENST00000444468 240 ntBASIC4.84□□□□□ -1.63
SLC6A4P31645 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC6A4P31645 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC6A4P31645 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.84□□□□□ -1.63
SLC6A4P31645 RPL10P17-201ENST00000453852 316 ntBASIC4.84□□□□□ -1.63
SLC6A4P31645 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC6A4P31645 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC6A4P31645 OR9M1P-201ENST00000459641 921 ntBASIC4.84□□□□□ -1.63
SLC6A4P31645 MEMO1P3-201ENST00000459811 302 ntBASIC4.84□□□□□ -1.63
SLC6A4P31645 AC091564.1-201ENST00000464563 479 ntBASIC4.84□□□□□ -1.63
SLC6A4P31645 AC092757.1-201ENST00000467293 467 ntBASIC4.84□□□□□ -1.63
SLC6A4P31645 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC6A4P31645 RPL36AP41-201ENST00000493820 306 ntBASIC4.84□□□□□ -1.63
SLC6A4P31645 AC138853.1-201ENST00000503549 823 ntBASIC4.84□□□□□ -1.63
SLC6A4P31645 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.84□□□□□ -1.63
SLC6A4P31645 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.84□□□□□ -1.63
SLC6A4P31645 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.84□□□□□ -1.63
SLC6A4P31645 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.84□□□□□ -1.63
SLC6A4P31645 RNA5SP249-201ENST00000516127 99 ntBASIC4.84□□□□□ -1.63
SLC6A4P31645 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.84□□□□□ -1.63
SLC6A4P31645 AC025881.1-201ENST00000518851 512 ntBASIC4.84□□□□□ -1.63
SLC6A4P31645 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.84□□□□□ -1.63
SLC6A4P31645 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.84□□□□□ -1.63
SLC6A4P31645 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SLC6A4P31645 AC016957.1-201ENST00000534895 309 ntBASIC4.84□□□□□ -1.63
SLC6A4P31645 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC6A4P31645 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.84□□□□□ -1.63
SLC6A4P31645 OR6C73P-201ENST00000546432 358 ntBASIC4.84□□□□□ -1.63
SLC6A4P31645 AC074029.1-201ENST00000552531 1044 ntBASIC4.84□□□□□ -1.63
SLC6A4P31645 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC6A4P31645 MIR4637-201ENST00000582405 84 ntBASIC4.84□□□□□ -1.63
SLC6A4P31645 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.84□□□□□ -1.63
SLC6A4P31645 AC068790.4-201ENST00000602474 263 ntBASIC4.84□□□□□ -1.63
SLC6A4P31645 BNIP3P11-201ENST00000603878 563 ntBASIC4.84□□□□□ -1.63
SLC6A4P31645 SEPT7P9-203ENST00000604116 343 ntBASIC4.84□□□□□ -1.63
SLC6A4P31645 AL357080.1-201ENST00000617394 239 ntBASIC4.84□□□□□ -1.63
SLC6A4P31645 ZFRP1-201ENST00000457579 2970 ntBASIC4.84□□□□□ -1.63
SLC6A4P31645 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SLC6A4P31645 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SLC6A4P31645 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
SLC6A4P31645 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
SLC6A4P31645 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SLC6A4P31645 AL731566.1-201ENST00000620490 1937 ntBASIC4.84□□□□□ -1.64
SLC6A4P31645 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.84□□□□□ -1.64
SLC6A4P31645 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
SLC6A4P31645 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SLC6A4P31645 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SLC6A4P31645 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SLC6A4P31645 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SLC6A4P31645 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.83□□□□□ -1.64
SLC6A4P31645 SAMMSON-213ENST00000641336 1521 ntBASIC4.83□□□□□ -1.64
SLC6A4P31645 MTND4P16-201ENST00000466108 1367 ntBASIC4.83□□□□□ -1.64
SLC6A4P31645 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SLC6A4P31645 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.83□□□□□ -1.64
SLC6A4P31645 RNU1-32P-201ENST00000363937 159 ntBASIC4.83□□□□□ -1.64
SLC6A4P31645 RNU6-348P-201ENST00000384386 107 ntBASIC4.83□□□□□ -1.64
SLC6A4P31645 SNRPEP2-201ENST00000397592 279 ntBASIC4.83□□□□□ -1.64
SLC6A4P31645 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SLC6A4P31645 AC022028.1-201ENST00000412054 408 ntBASIC4.83□□□□□ -1.64
SLC6A4P31645 RPL6P29-201ENST00000414863 865 ntBASIC4.83□□□□□ -1.64
SLC6A4P31645 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.83□□□□□ -1.64
SLC6A4P31645 FNDC3CP-201ENST00000420795 1155 ntBASIC4.83□□□□□ -1.64
SLC6A4P31645 EIF1P1-201ENST00000421436 341 ntBASIC4.83□□□□□ -1.64
SLC6A4P31645 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC6A4P31645 DNAJC19P7-201ENST00000428811 344 ntBASIC4.83□□□□□ -1.64
SLC6A4P31645 RPL37P21-201ENST00000435890 276 ntBASIC4.83□□□□□ -1.64
SLC6A4P31645 AC004938.1-201ENST00000438468 308 ntBASIC4.83□□□□□ -1.64
SLC6A4P31645 ELOCP10-201ENST00000440624 327 ntBASIC4.83□□□□□ -1.64
SLC6A4P31645 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.83□□□□□ -1.64
SLC6A4P31645 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.83□□□□□ -1.64
SLC6A4P31645 H2AFZP5-201ENST00000446960 382 ntBASIC4.83□□□□□ -1.64
SLC6A4P31645 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC6A4P31645 RPL7P31-201ENST00000450192 724 ntBASIC4.83□□□□□ -1.64
SLC6A4P31645 MTCO3P2-201ENST00000457365 171 ntBASIC4.83□□□□□ -1.64
SLC6A4P31645 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC6A4P31645 SNORD42A-201ENST00000459584 64 ntBASIC4.83□□□□□ -1.64
SLC6A4P31645 RPL5P22-201ENST00000480199 884 ntBASIC4.83□□□□□ -1.64
SLC6A4P31645 AC068587.1-201ENST00000483613 781 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms