Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AC078918.1-201ENST00000498515 228 ntBASIC3.84□□□□□ -1.79
PTPN4P29074 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PTPN4P29074 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PTPN4P29074 AC112206.4-201ENST00000515142 405 ntBASIC3.84□□□□□ -1.79
PTPN4P29074 RNU5A-7P-201ENST00000515979 116 ntBASIC3.84□□□□□ -1.79
PTPN4P29074 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PTPN4P29074 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.84□□□□□ -1.79
PTPN4P29074 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.84□□□□□ -1.79
PTPN4P29074 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.79
PTPN4P29074 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.84□□□□□ -1.79
PTPN4P29074 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.84□□□□□ -1.79
PTPN4P29074 AC090877.1-201ENST00000561418 344 ntBASIC3.84□□□□□ -1.79
PTPN4P29074 AC090616.5-202ENST00000582111 297 ntBASIC3.84□□□□□ -1.79
PTPN4P29074 AC017100.2-201ENST00000584628 355 ntBASIC3.84□□□□□ -1.79
PTPN4P29074 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.84□□□□□ -1.79
PTPN4P29074 AL133445.2-201ENST00000611191 527 ntBASIC3.84□□□□□ -1.79
PTPN4P29074 AC078880.5-201ENST00000617845 421 ntBASIC3.84□□□□□ -1.79
PTPN4P29074 AC068880.4-201ENST00000623082 495 ntBASIC3.84□□□□□ -1.79
PTPN4P29074 OR5BE1P-202ENST00000641168 1176 ntBASIC3.84□□□□□ -1.79
PTPN4P29074 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
PTPN4P29074 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PTPN4P29074 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.84□□□□□ -1.79
PTPN4P29074 FAM91A3P-201ENST00000456826 2544 ntBASIC3.84□□□□□ -1.8
PTPN4P29074 MTND5P28-201ENST00000438005 1594 ntBASIC3.84□□□□□ -1.8
PTPN4P29074 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PTPN4P29074 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.84□□□□□ -1.8
PTPN4P29074 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.84□□□□□ -1.8
PTPN4P29074 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PTPN4P29074 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTPN4P29074 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PTPN4P29074 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PTPN4P29074 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTPN4P29074 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTPN4P29074 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
PTPN4P29074 SNORA63.3-201ENST00000362682 132 ntBASIC3.83□□□□□ -1.8
PTPN4P29074 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.83□□□□□ -1.8
PTPN4P29074 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.83□□□□□ -1.8
PTPN4P29074 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.83□□□□□ -1.8
PTPN4P29074 MIR184-201ENST00000384962 84 ntBASIC3.83□□□□□ -1.8
PTPN4P29074 MIR670-201ENST00000390142 98 ntBASIC3.83□□□□□ -1.8
PTPN4P29074 RNA5SP171-201ENST00000391071 115 ntBASIC3.83□□□□□ -1.8
PTPN4P29074 RNU6-932P-201ENST00000391108 106 ntBASIC3.83□□□□□ -1.8
PTPN4P29074 RN7SKP285-201ENST00000410137 318 ntBASIC3.83□□□□□ -1.8
PTPN4P29074 RNU6-77P-201ENST00000410554 91 ntBASIC3.83□□□□□ -1.8
PTPN4P29074 RNU6-272P-201ENST00000411028 104 ntBASIC3.83□□□□□ -1.8
PTPN4P29074 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.83□□□□□ -1.8
PTPN4P29074 EI24P1-201ENST00000416584 867 ntBASIC3.83□□□□□ -1.8
PTPN4P29074 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.83□□□□□ -1.8
PTPN4P29074 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.83□□□□□ -1.8
PTPN4P29074 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.83□□□□□ -1.8
PTPN4P29074 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.83□□□□□ -1.8
PTPN4P29074 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.83□□□□□ -1.8
PTPN4P29074 RPS26P56-201ENST00000444468 240 ntBASIC3.83□□□□□ -1.8
PTPN4P29074 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.83□□□□□ -1.8
PTPN4P29074 RPS17P13-201ENST00000448974 407 ntBASIC3.83□□□□□ -1.8
PTPN4P29074 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.83□□□□□ -1.8
PTPN4P29074 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.83□□□□□ -1.8
PTPN4P29074 NANOGP10-201ENST00000453325 895 ntBASIC3.83□□□□□ -1.8
PTPN4P29074 AC034236.1-201ENST00000469891 373 ntBASIC3.83□□□□□ -1.8
PTPN4P29074 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.83□□□□□ -1.8
PTPN4P29074 GAPDHP36-201ENST00000480688 918 ntBASIC3.83□□□□□ -1.8
PTPN4P29074 AC073522.1-201ENST00000483312 377 ntBASIC3.83□□□□□ -1.8
PTPN4P29074 TRBV12-2-201ENST00000489763 344 ntBASIC3.83□□□□□ -1.8
PTPN4P29074 AP001086.1-201ENST00000494882 321 ntBASIC3.83□□□□□ -1.8
PTPN4P29074 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.83□□□□□ -1.8
PTPN4P29074 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.83□□□□□ -1.8
PTPN4P29074 NDUFB4P9-201ENST00000511646 388 ntBASIC3.83□□□□□ -1.8
PTPN4P29074 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.83□□□□□ -1.8
PTPN4P29074 PRELID3BP4-201ENST00000515476 571 ntBASIC3.83□□□□□ -1.8
PTPN4P29074 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
PTPN4P29074 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.83□□□□□ -1.8
PTPN4P29074 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.83□□□□□ -1.8
PTPN4P29074 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.83□□□□□ -1.8
PTPN4P29074 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.83□□□□□ -1.8
PTPN4P29074 MIR4738-201ENST00000579134 87 ntBASIC3.83□□□□□ -1.8
PTPN4P29074 MIR4444-1-201ENST00000581696 74 ntBASIC3.83□□□□□ -1.8
PTPN4P29074 MIR4444-2-201ENST00000584390 74 ntBASIC3.83□□□□□ -1.8
PTPN4P29074 AC107982.3-201ENST00000584957 985 ntBASIC3.83□□□□□ -1.8
PTPN4P29074 MIR5684-201ENST00000585074 65 ntBASIC3.83□□□□□ -1.8
PTPN4P29074 AC010928.3-201ENST00000587712 541 ntBASIC3.83□□□□□ -1.8
PTPN4P29074 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.83□□□□□ -1.8
PTPN4P29074 AC007566.2-201ENST00000603642 413 ntBASIC3.83□□□□□ -1.8
PTPN4P29074 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.83□□□□□ -1.8
PTPN4P29074 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
PTPN4P29074 AC008121.2-201ENST00000614647 523 ntBASIC3.83□□□□□ -1.8
PTPN4P29074 AC066616.2-201ENST00000559334 1481 ntBASIC3.83□□□□□ -1.8
PTPN4P29074 AL592494.2-201ENST00000425455 1548 ntBASIC3.83□□□□□ -1.8
PTPN4P29074 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PTPN4P29074 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.83□□□□□ -1.8
PTPN4P29074 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN4P29074 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN4P29074 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN4P29074 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN4P29074 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN4P29074 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN4P29074 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.82□□□□□ -1.8
PTPN4P29074 AC025263.3-201ENST00000622965 1396 ntBASIC3.82□□□□□ -1.8
PTPN4P29074 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
PTPN4P29074 SEPT7P7-201ENST00000420492 1301 ntBASIC3.82□□□□□ -1.8
PTPN4P29074 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms