Protein–RNA interactions for Protein: P28827

PTPRM, Receptor-type tyrosine-protein phosphatase mu, humanhuman

Predictions only

Length 1,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRMP28827 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC4.44□□□□□ -1.7
PTPRMP28827 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PTPRMP28827 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PTPRMP28827 ZNF603P-201ENST00000405613 487 ntBASIC4.44□□□□□ -1.7
PTPRMP28827 AL592148.1-201ENST00000413568 445 ntBASIC4.44□□□□□ -1.7
PTPRMP28827 NARSP2-201ENST00000518524 679 ntBASIC4.44□□□□□ -1.7
PTPRMP28827 AL358913.1-201ENST00000554342 121 ntBASIC4.44□□□□□ -1.7
PTPRMP28827 uc_338.1-201ENST00000612113 180 ntBASIC4.44□□□□□ -1.7
PTPRMP28827 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.44□□□□□ -1.7
PTPRMP28827 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.44□□□□□ -1.7
PTPRMP28827 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTPRMP28827 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PTPRMP28827 AP006437.1-201ENST00000641440 3685 ntBASIC4.44□□□□□ -1.7
PTPRMP28827 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PTPRMP28827 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTPRMP28827 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.44□□□□□ -1.7
PTPRMP28827 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.44□□□□□ -1.7
PTPRMP28827 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTPRMP28827 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
PTPRMP28827 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTPRMP28827 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PTPRMP28827 RPL7P25-201ENST00000404151 721 ntBASIC4.43□□□□□ -1.7
PTPRMP28827 MIR1289-2-201ENST00000408360 111 ntBASIC4.43□□□□□ -1.7
PTPRMP28827 RPL7P8-201ENST00000411964 730 ntBASIC4.43□□□□□ -1.7
PTPRMP28827 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.43□□□□□ -1.7
PTPRMP28827 UBE2D3P1-201ENST00000436669 444 ntBASIC4.43□□□□□ -1.7
PTPRMP28827 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTPRMP28827 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.43□□□□□ -1.7
PTPRMP28827 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.43□□□□□ -1.7
PTPRMP28827 MTCO3P20-201ENST00000454926 688 ntBASIC4.43□□□□□ -1.7
PTPRMP28827 AC111000.2-201ENST00000507775 550 ntBASIC4.43□□□□□ -1.7
PTPRMP28827 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.43□□□□□ -1.7
PTPRMP28827 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.43□□□□□ -1.7
PTPRMP28827 BNIP3P8-201ENST00000597863 560 ntBASIC4.43□□□□□ -1.7
PTPRMP28827 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.43□□□□□ -1.7
PTPRMP28827 uc_338.32-201ENST00000615087 172 ntBASIC4.43□□□□□ -1.7
PTPRMP28827 AC099063.3-201ENST00000642066 185 ntBASIC4.43□□□□□ -1.7
PTPRMP28827 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTPRMP28827 ZNF72P-201ENST00000425869 1908 ntBASIC4.43□□□□□ -1.7
PTPRMP28827 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.43□□□□□ -1.7
PTPRMP28827 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.43□□□□□ -1.7
PTPRMP28827 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.43□□□□□ -1.7
PTPRMP28827 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTPRMP28827 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PTPRMP28827 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
PTPRMP28827 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.43□□□□□ -1.7
PTPRMP28827 MIR2276-201ENST00000516886 89 ntBASIC4.43□□□□□ -1.7
PTPRMP28827 AC022882.1-201ENST00000532142 501 ntBASIC4.43□□□□□ -1.7
PTPRMP28827 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC4.43□□□□□ -1.7
PTPRMP28827 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
PTPRMP28827 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PTPRMP28827 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
PTPRMP28827 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTPRMP28827 RPL7P26-201ENST00000333817 754 ntBASIC4.42□□□□□ -1.7
PTPRMP28827 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.42□□□□□ -1.7
PTPRMP28827 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.42□□□□□ -1.7
PTPRMP28827 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.42□□□□□ -1.7
PTPRMP28827 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.42□□□□□ -1.7
PTPRMP28827 PRDX3P4-201ENST00000470828 747 ntBASIC4.42□□□□□ -1.7
PTPRMP28827 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.42□□□□□ -1.7
PTPRMP28827 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PTPRMP28827 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PTPRMP28827 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.41□□□□□ -1.7
PTPRMP28827 AC007496.3-201ENST00000624987 3443 ntBASIC4.41□□□□□ -1.7
PTPRMP28827 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PTPRMP28827 RNU6-851P-201ENST00000384565 107 ntBASIC4.41□□□□□ -1.7
PTPRMP28827 5S_rRNA.2-201ENST00000391293 112 ntBASIC4.41□□□□□ -1.7
PTPRMP28827 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.41□□□□□ -1.7
PTPRMP28827 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PTPRMP28827 RN7SL20P-201ENST00000488827 297 ntBASIC4.41□□□□□ -1.7
PTPRMP28827 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC4.41□□□□□ -1.7
PTPRMP28827 TRAV37-201ENST00000553906 342 ntBASIC4.41□□□□□ -1.7
PTPRMP28827 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.41□□□□□ -1.7
PTPRMP28827 AC096947.1-201ENST00000603233 470 ntBASIC4.41□□□□□ -1.7
PTPRMP28827 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC4.41□□□□□ -1.7
PTPRMP28827 AL356274.1-201ENST00000617064 410 ntBASIC4.41□□□□□ -1.7
PTPRMP28827 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.4□□□□□ -1.7
PTPRMP28827 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.71
PTPRMP28827 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PTPRMP28827 OR6C64P-201ENST00000419708 825 ntBASIC4.4□□□□□ -1.71
PTPRMP28827 NPM1P24-201ENST00000428039 894 ntBASIC4.4□□□□□ -1.71
PTPRMP28827 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.4□□□□□ -1.71
PTPRMP28827 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.4□□□□□ -1.71
PTPRMP28827 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.4□□□□□ -1.71
PTPRMP28827 RN7SKP283-201ENST00000517197 270 ntBASIC4.4□□□□□ -1.71
PTPRMP28827 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.4□□□□□ -1.71
PTPRMP28827 OR11H5P-201ENST00000554039 926 ntBASIC4.4□□□□□ -1.71
PTPRMP28827 AC078899.3-201ENST00000599065 212 ntBASIC4.4□□□□□ -1.71
PTPRMP28827 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.4□□□□□ -1.71
PTPRMP28827 AC092184.1-201ENST00000625042 715 ntBASIC4.4□□□□□ -1.71
PTPRMP28827 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PTPRMP28827 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
PTPRMP28827 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
PTPRMP28827 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PTPRMP28827 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PTPRMP28827 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PTPRMP28827 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
PTPRMP28827 MIR30E-201ENST00000362104 92 ntBASIC4.39□□□□□ -1.71
PTPRMP28827 RNA5SP99-201ENST00000364020 114 ntBASIC4.39□□□□□ -1.71
PTPRMP28827 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 175.4 ms