Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CD40P25942 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CD40P25942 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CD40P25942 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CD40P25942 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CD40P25942 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CD40P25942 MIR133B-201ENST00000362210 119 ntBASIC4.73□□□□□ -1.65
CD40P25942 RNU6-1322P-201ENST00000364309 107 ntBASIC4.73□□□□□ -1.65
CD40P25942 RNU1-39P-201ENST00000383897 165 ntBASIC4.73□□□□□ -1.65
CD40P25942 Y_RNA.481-201ENST00000384373 102 ntBASIC4.73□□□□□ -1.65
CD40P25942 MIR223-201ENST00000385204 110 ntBASIC4.73□□□□□ -1.65
CD40P25942 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.73□□□□□ -1.65
CD40P25942 SRSF1P1-201ENST00000424058 520 ntBASIC4.73□□□□□ -1.65
CD40P25942 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.73□□□□□ -1.65
CD40P25942 SLC25A18P1-201ENST00000449385 454 ntBASIC4.73□□□□□ -1.65
CD40P25942 RAD23BP3-201ENST00000454157 1152 ntBASIC4.73□□□□□ -1.65
CD40P25942 RNU6-420P-201ENST00000458780 107 ntBASIC4.73□□□□□ -1.65
CD40P25942 RN7SL799P-201ENST00000475891 298 ntBASIC4.73□□□□□ -1.65
CD40P25942 RPS17P5-201ENST00000498293 408 ntBASIC4.73□□□□□ -1.65
CD40P25942 PGAM1P13-201ENST00000507497 754 ntBASIC4.73□□□□□ -1.65
CD40P25942 AC117522.1-201ENST00000509821 380 ntBASIC4.73□□□□□ -1.65
CD40P25942 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.73□□□□□ -1.65
CD40P25942 RNU6-358P-201ENST00000516564 75 ntBASIC4.73□□□□□ -1.65
CD40P25942 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.73□□□□□ -1.65
CD40P25942 HMGB1P40-201ENST00000525121 540 ntBASIC4.73□□□□□ -1.65
CD40P25942 AC104383.1-201ENST00000530297 370 ntBASIC4.73□□□□□ -1.65
CD40P25942 AC068446.3-201ENST00000555285 382 ntBASIC4.73□□□□□ -1.65
CD40P25942 AL161713.1-201ENST00000555538 145 ntBASIC4.73□□□□□ -1.65
CD40P25942 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.73□□□□□ -1.65
CD40P25942 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
CD40P25942 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.73□□□□□ -1.65
CD40P25942 RPL26P30-202ENST00000602923 645 ntBASIC4.73□□□□□ -1.65
CD40P25942 AC025253.1-201ENST00000613623 543 ntBASIC4.73□□□□□ -1.65
CD40P25942 AC002550.2-201ENST00000621246 394 ntBASIC4.73□□□□□ -1.65
CD40P25942 AC009033.1-201ENST00000624279 431 ntBASIC4.73□□□□□ -1.65
CD40P25942 AC009161.2-201ENST00000624626 138 ntBASIC4.73□□□□□ -1.65
CD40P25942 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CD40P25942 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CD40P25942 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CD40P25942 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC4.73□□□□□ -1.65
CD40P25942 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CD40P25942 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.73□□□□□ -1.65
CD40P25942 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CD40P25942 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CD40P25942 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CD40P25942 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CD40P25942 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CD40P25942 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CD40P25942 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CD40P25942 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CD40P25942 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.72□□□□□ -1.65
CD40P25942 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CD40P25942 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.72□□□□□ -1.65
CD40P25942 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.72□□□□□ -1.65
CD40P25942 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CD40P25942 AC105074.1-201ENST00000623380 3095 ntBASIC4.72□□□□□ -1.65
CD40P25942 ASNSP1-201ENST00000518311 1939 ntBASIC4.72□□□□□ -1.65
CD40P25942 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CD40P25942 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CD40P25942 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.72□□□□□ -1.65
CD40P25942 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CD40P25942 AC005294.1-201ENST00000355509 281 ntBASIC4.72□□□□□ -1.65
CD40P25942 Y_RNA.38-201ENST00000362617 102 ntBASIC4.72□□□□□ -1.65
CD40P25942 Y_RNA.70-201ENST00000362886 110 ntBASIC4.72□□□□□ -1.65
CD40P25942 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.72□□□□□ -1.65
CD40P25942 SNORA16A-201ENST00000384342 137 ntBASIC4.72□□□□□ -1.65
CD40P25942 MIR19A-201ENST00000384878 82 ntBASIC4.72□□□□□ -1.65
CD40P25942 MT-TL1-201ENST00000386347 75 ntBASIC4.72□□□□□ -1.65
CD40P25942 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CD40P25942 RNA5SP339-201ENST00000390987 122 ntBASIC4.72□□□□□ -1.65
CD40P25942 AL133388.1-201ENST00000404509 287 ntBASIC4.72□□□□□ -1.65
CD40P25942 MIR1250-201ENST00000408098 113 ntBASIC4.72□□□□□ -1.65
CD40P25942 RNU4-34P-201ENST00000410431 124 ntBASIC4.72□□□□□ -1.65
CD40P25942 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.72□□□□□ -1.65
CD40P25942 AC005517.2-201ENST00000424673 553 ntBASIC4.72□□□□□ -1.65
CD40P25942 AL590399.2-201ENST00000427536 309 ntBASIC4.72□□□□□ -1.65
CD40P25942 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CD40P25942 RPL23AP30-201ENST00000432419 501 ntBASIC4.72□□□□□ -1.65
CD40P25942 GSTM5P1-201ENST00000434751 660 ntBASIC4.72□□□□□ -1.65
CD40P25942 AL627308.1-201ENST00000435693 821 ntBASIC4.72□□□□□ -1.65
CD40P25942 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.72□□□□□ -1.65
CD40P25942 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.72□□□□□ -1.65
CD40P25942 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.72□□□□□ -1.65
CD40P25942 IFNWP4-201ENST00000453148 294 ntBASIC4.72□□□□□ -1.65
CD40P25942 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.72□□□□□ -1.65
CD40P25942 RN7SL172P-201ENST00000460535 303 ntBASIC4.72□□□□□ -1.65
CD40P25942 RN7SL188P-201ENST00000469842 285 ntBASIC4.72□□□□□ -1.65
CD40P25942 RPS21P4-201ENST00000487122 248 ntBASIC4.72□□□□□ -1.65
CD40P25942 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.72□□□□□ -1.65
CD40P25942 AC006499.3-201ENST00000506077 748 ntBASIC4.72□□□□□ -1.65
CD40P25942 HIGD1AP14-201ENST00000507617 282 ntBASIC4.72□□□□□ -1.65
CD40P25942 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.72□□□□□ -1.65
CD40P25942 AC017037.2-201ENST00000513850 890 ntBASIC4.72□□□□□ -1.65
CD40P25942 RNU6-798P-201ENST00000516912 103 ntBASIC4.72□□□□□ -1.65
CD40P25942 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.72□□□□□ -1.65
CD40P25942 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.72□□□□□ -1.65
CD40P25942 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.72□□□□□ -1.65
CD40P25942 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.72□□□□□ -1.65
CD40P25942 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.72□□□□□ -1.65
CD40P25942 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms