Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 OR4P1P-201ENST00000530808 1136 ntBASIC4.51□□□□□ -1.69
BDNFP23560 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.51□□□□□ -1.69
BDNFP23560 AC018630.1-201ENST00000541376 925 ntBASIC4.51□□□□□ -1.69
BDNFP23560 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.51□□□□□ -1.69
BDNFP23560 AL389895.1-201ENST00000554127 252 ntBASIC4.51□□□□□ -1.69
BDNFP23560 AL109766.1-201ENST00000555080 552 ntBASIC4.51□□□□□ -1.69
BDNFP23560 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.51□□□□□ -1.69
BDNFP23560 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.51□□□□□ -1.69
BDNFP23560 BNIP3P24-201ENST00000593398 557 ntBASIC4.51□□□□□ -1.69
BDNFP23560 AC124312.4-201ENST00000605533 310 ntBASIC4.51□□□□□ -1.69
BDNFP23560 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.51□□□□□ -1.69
BDNFP23560 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.51□□□□□ -1.69
BDNFP23560 AC005332.6-201ENST00000613178 446 ntBASIC4.51□□□□□ -1.69
BDNFP23560 AC068831.8-201ENST00000620171 435 ntBASIC4.51□□□□□ -1.69
BDNFP23560 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.51□□□□□ -1.69
BDNFP23560 MIR8059-201ENST00000620427 81 ntBASIC4.51□□□□□ -1.69
BDNFP23560 AC010872.1-201ENST00000624225 675 ntBASIC4.51□□□□□ -1.69
BDNFP23560 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.51□□□□□ -1.69
BDNFP23560 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
BDNFP23560 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.51□□□□□ -1.69
BDNFP23560 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.51□□□□□ -1.69
BDNFP23560 AC092435.4-201ENST00000623012 4159 ntBASIC4.51□□□□□ -1.69
BDNFP23560 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.51□□□□□ -1.69
BDNFP23560 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
BDNFP23560 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
BDNFP23560 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.5□□□□□ -1.69
BDNFP23560 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
BDNFP23560 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
BDNFP23560 RNU1-20P-201ENST00000363314 162 ntBASIC4.5□□□□□ -1.69
BDNFP23560 RNA5SP22-201ENST00000365393 109 ntBASIC4.5□□□□□ -1.69
BDNFP23560 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
BDNFP23560 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
BDNFP23560 RNU6-712P-201ENST00000410558 100 ntBASIC4.5□□□□□ -1.69
BDNFP23560 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.5□□□□□ -1.69
BDNFP23560 OR1AA1P-201ENST00000419597 916 ntBASIC4.5□□□□□ -1.69
BDNFP23560 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.5□□□□□ -1.69
BDNFP23560 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.5□□□□□ -1.69
BDNFP23560 COX6B1P7-201ENST00000430845 235 ntBASIC4.5□□□□□ -1.69
BDNFP23560 BTF3P10-201ENST00000433415 495 ntBASIC4.5□□□□□ -1.69
BDNFP23560 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
BDNFP23560 AC069285.2-201ENST00000440210 275 ntBASIC4.5□□□□□ -1.69
BDNFP23560 MTCYBP11-201ENST00000447254 1109 ntBASIC4.5□□□□□ -1.69
BDNFP23560 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.5□□□□□ -1.69
BDNFP23560 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.5□□□□□ -1.69
BDNFP23560 AC005008.1-201ENST00000456151 612 ntBASIC4.5□□□□□ -1.69
BDNFP23560 AC087312.1-201ENST00000471411 480 ntBASIC4.5□□□□□ -1.69
BDNFP23560 AC012158.1-204ENST00000483430 465 ntBASIC4.5□□□□□ -1.69
BDNFP23560 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.5□□□□□ -1.69
BDNFP23560 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
BDNFP23560 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.5□□□□□ -1.69
BDNFP23560 AC006390.1-201ENST00000508068 283 ntBASIC4.5□□□□□ -1.69
BDNFP23560 MTCO1P35-201ENST00000515270 228 ntBASIC4.5□□□□□ -1.69
BDNFP23560 RNU6-1261P-201ENST00000517194 104 ntBASIC4.5□□□□□ -1.69
BDNFP23560 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.5□□□□□ -1.69
BDNFP23560 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.5□□□□□ -1.69
BDNFP23560 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.5□□□□□ -1.69
BDNFP23560 AC006064.5-201ENST00000541782 248 ntBASIC4.5□□□□□ -1.69
BDNFP23560 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
BDNFP23560 SYF2P1-201ENST00000550658 413 ntBASIC4.5□□□□□ -1.69
BDNFP23560 GTF2IP8-201ENST00000560687 584 ntBASIC4.5□□□□□ -1.69
BDNFP23560 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.5□□□□□ -1.69
BDNFP23560 AC069545.1-201ENST00000605671 358 ntBASIC4.5□□□□□ -1.69
BDNFP23560 AC092653.1-201ENST00000608509 531 ntBASIC4.5□□□□□ -1.69
BDNFP23560 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.5□□□□□ -1.69
BDNFP23560 AL138721.1-201ENST00000616756 179 ntBASIC4.5□□□□□ -1.69
BDNFP23560 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.5□□□□□ -1.69
BDNFP23560 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.5□□□□□ -1.69
BDNFP23560 AL590240.3-201ENST00000621416 943 ntBASIC4.5□□□□□ -1.69
BDNFP23560 AF117829.1-206ENST00000621883 3802 ntBASIC4.5□□□□□ -1.69
BDNFP23560 AC068724.3-201ENST00000625906 87 ntBASIC4.5□□□□□ -1.69
BDNFP23560 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.5□□□□□ -1.69
BDNFP23560 AC106858.1-201ENST00000637497 429 ntBASIC4.5□□□□□ -1.69
BDNFP23560 MKKS-204ENST00000639674 192 ntBASIC4.5□□□□□ -1.69
BDNFP23560 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
BDNFP23560 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
BDNFP23560 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
BDNFP23560 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
BDNFP23560 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.49□□□□□ -1.69
BDNFP23560 PRO1804-201ENST00000623780 2050 ntBASIC4.49□□□□□ -1.69
BDNFP23560 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
BDNFP23560 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
BDNFP23560 RNU6-298P-201ENST00000390888 96 ntBASIC4.49□□□□□ -1.69
BDNFP23560 RN7SKP182-201ENST00000410772 298 ntBASIC4.49□□□□□ -1.69
BDNFP23560 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.49□□□□□ -1.69
BDNFP23560 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.49□□□□□ -1.69
BDNFP23560 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.49□□□□□ -1.69
BDNFP23560 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.49□□□□□ -1.69
BDNFP23560 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC4.49□□□□□ -1.69
BDNFP23560 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.49□□□□□ -1.69
BDNFP23560 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.49□□□□□ -1.69
BDNFP23560 COX6CP18-201ENST00000448769 222 ntBASIC4.49□□□□□ -1.69
BDNFP23560 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
BDNFP23560 AC092757.1-201ENST00000467293 467 ntBASIC4.49□□□□□ -1.69
BDNFP23560 AC146944.2-203ENST00000502493 354 ntBASIC4.49□□□□□ -1.69
BDNFP23560 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.49□□□□□ -1.69
BDNFP23560 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.49□□□□□ -1.69
BDNFP23560 MLLT10P2-201ENST00000506434 249 ntBASIC4.49□□□□□ -1.69
BDNFP23560 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.49□□□□□ -1.69
BDNFP23560 AC139495.1-202ENST00000513164 354 ntBASIC4.49□□□□□ -1.69
BDNFP23560 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms