Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
HLA-DOBP13765 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DOBP13765 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DOBP13765 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DOBP13765 ZNF833P-201ENST00000424938 1494 ntBASIC3.87□□□□□ -1.79
HLA-DOBP13765 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
HLA-DOBP13765 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.87□□□□□ -1.79
HLA-DOBP13765 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DOBP13765 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DOBP13765 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HLA-DOBP13765 RPL23AP29-201ENST00000397284 453 ntBASIC3.87□□□□□ -1.79
HLA-DOBP13765 AL450338.1-201ENST00000407987 512 ntBASIC3.87□□□□□ -1.79
HLA-DOBP13765 NPM1P11-201ENST00000417106 855 ntBASIC3.87□□□□□ -1.79
HLA-DOBP13765 MTCYBP38-201ENST00000417160 1123 ntBASIC3.87□□□□□ -1.79
HLA-DOBP13765 NIPA2P1-201ENST00000426223 976 ntBASIC3.87□□□□□ -1.79
HLA-DOBP13765 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.87□□□□□ -1.79
HLA-DOBP13765 AC023347.2-201ENST00000433994 462 ntBASIC3.87□□□□□ -1.79
HLA-DOBP13765 RPL23AP52-201ENST00000439311 478 ntBASIC3.87□□□□□ -1.79
HLA-DOBP13765 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.87□□□□□ -1.79
HLA-DOBP13765 AC239809.1-201ENST00000450470 217 ntBASIC3.87□□□□□ -1.79
HLA-DOBP13765 RPL26P28-201ENST00000451325 435 ntBASIC3.87□□□□□ -1.79
HLA-DOBP13765 RN7SL738P-201ENST00000470264 297 ntBASIC3.87□□□□□ -1.79
HLA-DOBP13765 RN7SL459P-201ENST00000481078 302 ntBASIC3.87□□□□□ -1.79
HLA-DOBP13765 AC013356.1-201ENST00000489027 564 ntBASIC3.87□□□□□ -1.79
HLA-DOBP13765 AC108078.3-201ENST00000502633 489 ntBASIC3.87□□□□□ -1.79
HLA-DOBP13765 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.87□□□□□ -1.79
HLA-DOBP13765 MTCYBP37-201ENST00000510642 1133 ntBASIC3.87□□□□□ -1.79
HLA-DOBP13765 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
HLA-DOBP13765 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.87□□□□□ -1.79
HLA-DOBP13765 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DOBP13765 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.87□□□□□ -1.79
HLA-DOBP13765 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.87□□□□□ -1.79
HLA-DOBP13765 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.87□□□□□ -1.79
HLA-DOBP13765 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.87□□□□□ -1.79
HLA-DOBP13765 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.87□□□□□ -1.79
HLA-DOBP13765 EIF5A2P1-201ENST00000564027 460 ntBASIC3.87□□□□□ -1.79
HLA-DOBP13765 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC3.87□□□□□ -1.79
HLA-DOBP13765 AC110743.1-201ENST00000584870 478 ntBASIC3.87□□□□□ -1.79
HLA-DOBP13765 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.87□□□□□ -1.79
HLA-DOBP13765 AP001981.2-201ENST00000603241 418 ntBASIC3.87□□□□□ -1.79
HLA-DOBP13765 AC090948.1-201ENST00000607464 549 ntBASIC3.87□□□□□ -1.79
HLA-DOBP13765 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC3.87□□□□□ -1.79
HLA-DOBP13765 AP001005.3-201ENST00000622049 129 ntBASIC3.87□□□□□ -1.79
HLA-DOBP13765 AC019278.1-201ENST00000623516 479 ntBASIC3.87□□□□□ -1.79
HLA-DOBP13765 AC098679.4-201ENST00000624241 654 ntBASIC3.87□□□□□ -1.79
HLA-DOBP13765 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.87□□□□□ -1.79
HLA-DOBP13765 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
HLA-DOBP13765 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
HLA-DOBP13765 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.87□□□□□ -1.79
HLA-DOBP13765 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HLA-DOBP13765 AL390237.1-201ENST00000404226 1415 ntBASIC3.87□□□□□ -1.79
HLA-DOBP13765 AC139713.2-214ENST00000642059 1811 ntBASIC3.86□□□□□ -1.79
HLA-DOBP13765 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DOBP13765 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DOBP13765 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.86□□□□□ -1.79
HLA-DOBP13765 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DOBP13765 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.86□□□□□ -1.79
HLA-DOBP13765 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DOBP13765 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
HLA-DOBP13765 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
HLA-DOBP13765 OR4A15-201ENST00000314706 1035 ntBASIC3.86□□□□□ -1.79
HLA-DOBP13765 RNU1-94P-201ENST00000362627 173 ntBASIC3.86□□□□□ -1.79
HLA-DOBP13765 RNA5SP447-201ENST00000363749 119 ntBASIC3.86□□□□□ -1.79
HLA-DOBP13765 RNA5SP175-201ENST00000364275 119 ntBASIC3.86□□□□□ -1.79
HLA-DOBP13765 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.86□□□□□ -1.79
HLA-DOBP13765 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
HLA-DOBP13765 SNORD116-4-201ENST00000384733 96 ntBASIC3.86□□□□□ -1.79
HLA-DOBP13765 MT-TH-201ENST00000387441 69 ntBASIC3.86□□□□□ -1.79
HLA-DOBP13765 DSTNP4-201ENST00000399472 474 ntBASIC3.86□□□□□ -1.79
HLA-DOBP13765 AL355379.1-201ENST00000405542 640 ntBASIC3.86□□□□□ -1.79
HLA-DOBP13765 RPL31P52-201ENST00000407532 367 ntBASIC3.86□□□□□ -1.79
HLA-DOBP13765 RNU2-28P-201ENST00000410457 189 ntBASIC3.86□□□□□ -1.79
HLA-DOBP13765 RNA5SP146-201ENST00000410743 123 ntBASIC3.86□□□□□ -1.79
HLA-DOBP13765 RN7SKP216-201ENST00000411050 312 ntBASIC3.86□□□□□ -1.79
HLA-DOBP13765 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.86□□□□□ -1.79
HLA-DOBP13765 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.86□□□□□ -1.79
HLA-DOBP13765 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.86□□□□□ -1.79
HLA-DOBP13765 SDCBPP2-201ENST00000424643 885 ntBASIC3.86□□□□□ -1.79
HLA-DOBP13765 RPS26P47-201ENST00000427219 348 ntBASIC3.86□□□□□ -1.79
HLA-DOBP13765 VDAC1P6-201ENST00000430062 855 ntBASIC3.86□□□□□ -1.79
HLA-DOBP13765 MTND1P20-201ENST00000430341 950 ntBASIC3.86□□□□□ -1.79
HLA-DOBP13765 AC010153.1-201ENST00000432862 727 ntBASIC3.86□□□□□ -1.79
HLA-DOBP13765 TMX2P1-201ENST00000436507 708 ntBASIC3.86□□□□□ -1.79
HLA-DOBP13765 YWHAZP8-201ENST00000436935 731 ntBASIC3.86□□□□□ -1.79
HLA-DOBP13765 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.86□□□□□ -1.79
HLA-DOBP13765 RPS26P56-201ENST00000444468 240 ntBASIC3.86□□□□□ -1.79
HLA-DOBP13765 AL360221.1-201ENST00000445989 335 ntBASIC3.86□□□□□ -1.79
HLA-DOBP13765 PHBP16-201ENST00000446318 950 ntBASIC3.86□□□□□ -1.79
HLA-DOBP13765 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HLA-DOBP13765 MTCO1P48-201ENST00000448024 1096 ntBASIC3.86□□□□□ -1.79
HLA-DOBP13765 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.86□□□□□ -1.79
HLA-DOBP13765 ABCF2P2-201ENST00000450549 296 ntBASIC3.86□□□□□ -1.79
HLA-DOBP13765 snoU13.1-201ENST00000459157 104 ntBASIC3.86□□□□□ -1.79
HLA-DOBP13765 RPL30P11-201ENST00000495304 339 ntBASIC3.86□□□□□ -1.79
HLA-DOBP13765 SNX5P1-201ENST00000505757 1041 ntBASIC3.86□□□□□ -1.79
HLA-DOBP13765 MTCO3P7-201ENST00000510008 774 ntBASIC3.86□□□□□ -1.79
HLA-DOBP13765 RNU6-583P-201ENST00000516012 92 ntBASIC3.86□□□□□ -1.79
HLA-DOBP13765 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.86□□□□□ -1.79
HLA-DOBP13765 NDUFA5P2-201ENST00000519723 344 ntBASIC3.86□□□□□ -1.79
HLA-DOBP13765 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms