Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.99□□□□□ -1.61
TOP2AP11388 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.99□□□□□ -1.61
TOP2AP11388 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.99□□□□□ -1.61
TOP2AP11388 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TOP2AP11388 AC138393.1-206ENST00000540997 1886 ntBASIC4.99□□□□□ -1.61
TOP2AP11388 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TOP2AP11388 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.98□□□□□ -1.61
TOP2AP11388 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.98□□□□□ -1.61
TOP2AP11388 SNORD56.3-201ENST00000363507 71 ntBASIC4.98□□□□□ -1.61
TOP2AP11388 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TOP2AP11388 AC006960.1-201ENST00000419980 153 ntBASIC4.98□□□□□ -1.61
TOP2AP11388 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.98□□□□□ -1.61
TOP2AP11388 RPL7L1P1-201ENST00000448259 785 ntBASIC4.98□□□□□ -1.61
TOP2AP11388 AC006539.3-201ENST00000454258 129 ntBASIC4.98□□□□□ -1.61
TOP2AP11388 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.98□□□□□ -1.61
TOP2AP11388 AC104687.1-201ENST00000485829 412 ntBASIC4.98□□□□□ -1.61
TOP2AP11388 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.98□□□□□ -1.61
TOP2AP11388 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.98□□□□□ -1.61
TOP2AP11388 Z82195.1-201ENST00000604558 398 ntBASIC4.98□□□□□ -1.61
TOP2AP11388 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TOP2AP11388 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TOP2AP11388 NACAP7-201ENST00000407371 609 ntBASIC4.97□□□□□ -1.61
TOP2AP11388 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TOP2AP11388 RPL32P35-201ENST00000415214 394 ntBASIC4.97□□□□□ -1.61
TOP2AP11388 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TOP2AP11388 AC090525.1-201ENST00000479116 478 ntBASIC4.97□□□□□ -1.61
TOP2AP11388 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.97□□□□□ -1.61
TOP2AP11388 AL157394.1-201ENST00000562983 1224 ntBASIC4.97□□□□□ -1.61
TOP2AP11388 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.97□□□□□ -1.61
TOP2AP11388 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TOP2AP11388 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TOP2AP11388 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
TOP2AP11388 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TOP2AP11388 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TOP2AP11388 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.97□□□□□ -1.61
TOP2AP11388 AC127526.1-201ENST00000417526 366 ntBASIC4.97□□□□□ -1.61
TOP2AP11388 AL513328.1-201ENST00000446460 224 ntBASIC4.97□□□□□ -1.61
TOP2AP11388 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
TOP2AP11388 MIR2114-201ENST00000516645 80 ntBASIC4.97□□□□□ -1.61
TOP2AP11388 COX6B1P6-201ENST00000522347 255 ntBASIC4.97□□□□□ -1.61
TOP2AP11388 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.97□□□□□ -1.61
TOP2AP11388 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.97□□□□□ -1.61
TOP2AP11388 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.97□□□□□ -1.61
TOP2AP11388 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TOP2AP11388 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.96□□□□□ -1.62
TOP2AP11388 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TOP2AP11388 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TOP2AP11388 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.96□□□□□ -1.62
TOP2AP11388 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.96□□□□□ -1.62
TOP2AP11388 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC4.96□□□□□ -1.62
TOP2AP11388 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.96□□□□□ -1.62
TOP2AP11388 AC126121.1-201ENST00000482313 553 ntBASIC4.96□□□□□ -1.62
TOP2AP11388 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TOP2AP11388 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.96□□□□□ -1.62
TOP2AP11388 MIR4435-1-201ENST00000582552 80 ntBASIC4.96□□□□□ -1.62
TOP2AP11388 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.96□□□□□ -1.62
TOP2AP11388 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
TOP2AP11388 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
TOP2AP11388 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
TOP2AP11388 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
TOP2AP11388 RPS7P13-201ENST00000413955 498 ntBASIC4.95□□□□□ -1.62
TOP2AP11388 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.95□□□□□ -1.62
TOP2AP11388 AL365396.1-201ENST00000430854 671 ntBASIC4.95□□□□□ -1.62
TOP2AP11388 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.95□□□□□ -1.62
TOP2AP11388 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.95□□□□□ -1.62
TOP2AP11388 AP002812.4-201ENST00000532139 286 ntBASIC4.95□□□□□ -1.62
TOP2AP11388 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.95□□□□□ -1.62
TOP2AP11388 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
TOP2AP11388 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.94□□□□□ -1.62
TOP2AP11388 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TOP2AP11388 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
TOP2AP11388 SNORA46-201ENST00000384762 135 ntBASIC4.94□□□□□ -1.62
TOP2AP11388 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.94□□□□□ -1.62
TOP2AP11388 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.94□□□□□ -1.62
TOP2AP11388 AP000936.3-201ENST00000438127 255 ntBASIC4.94□□□□□ -1.62
TOP2AP11388 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TOP2AP11388 SERPINE4P-201ENST00000554978 281 ntBASIC4.94□□□□□ -1.62
TOP2AP11388 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.94□□□□□ -1.62
TOP2AP11388 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.94□□□□□ -1.62
TOP2AP11388 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
TOP2AP11388 MTCO1P22-201ENST00000604619 1360 ntBASIC4.94□□□□□ -1.62
TOP2AP11388 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TOP2AP11388 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TOP2AP11388 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.93□□□□□ -1.62
TOP2AP11388 MYL8P-204ENST00000431574 518 ntBASIC4.93□□□□□ -1.62
TOP2AP11388 MTCO1P52-201ENST00000433928 531 ntBASIC4.93□□□□□ -1.62
TOP2AP11388 AC003982.1-202ENST00000469928 248 ntBASIC4.93□□□□□ -1.62
TOP2AP11388 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.93□□□□□ -1.62
TOP2AP11388 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.93□□□□□ -1.62
TOP2AP11388 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
TOP2AP11388 AL132656.3-201ENST00000606384 1595 ntBASIC4.93□□□□□ -1.62
TOP2AP11388 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
TOP2AP11388 U3.11-201ENST00000364476 212 ntBASIC4.92□□□□□ -1.62
TOP2AP11388 MIR1261-201ENST00000408659 82 ntBASIC4.92□□□□□ -1.62
TOP2AP11388 RPS12P23-201ENST00000419579 400 ntBASIC4.92□□□□□ -1.62
TOP2AP11388 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.92□□□□□ -1.62
TOP2AP11388 RPL23AP4-201ENST00000427757 463 ntBASIC4.92□□□□□ -1.62
TOP2AP11388 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.92□□□□□ -1.62
TOP2AP11388 MRPL35P4-201ENST00000453682 566 ntBASIC4.92□□□□□ -1.62
TOP2AP11388 RN7SL633P-201ENST00000488974 297 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms