Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 BBIP1P1-201ENST00000602999 279 ntBASIC5.49□□□□□ -1.53
HMGB1P09429 AC004853.1-201ENST00000604902 698 ntBASIC5.49□□□□□ -1.53
HMGB1P09429 AL390208.1-201ENST00000605885 644 ntBASIC5.49□□□□□ -1.53
HMGB1P09429 AL391261.4-201ENST00000616012 481 ntBASIC5.49□□□□□ -1.53
HMGB1P09429 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
HMGB1P09429 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.49□□□□□ -1.53
HMGB1P09429 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
HMGB1P09429 AP002001.2-201ENST00000529025 1469 ntBASIC5.49□□□□□ -1.53
HMGB1P09429 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.49□□□□□ -1.53
HMGB1P09429 AL645937.1-201ENST00000641739 1652 ntBASIC5.49□□□□□ -1.53
HMGB1P09429 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
HMGB1P09429 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
HMGB1P09429 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HMGB1P09429 PRO1804-201ENST00000623780 2050 ntBASIC5.49□□□□□ -1.53
HMGB1P09429 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
HMGB1P09429 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HMGB1P09429 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
HMGB1P09429 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HMGB1P09429 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HMGB1P09429 AC108751.5-201ENST00000492880 1336 ntBASIC5.48□□□□□ -1.53
HMGB1P09429 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.48□□□□□ -1.53
HMGB1P09429 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGB1P09429 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.48□□□□□ -1.53
HMGB1P09429 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMGB1P09429 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.48□□□□□ -1.53
HMGB1P09429 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.48□□□□□ -1.53
HMGB1P09429 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMGB1P09429 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.48□□□□□ -1.53
HMGB1P09429 RNA5SP87-201ENST00000384155 118 ntBASIC5.48□□□□□ -1.53
HMGB1P09429 RPL23AP29-201ENST00000397284 453 ntBASIC5.48□□□□□ -1.53
HMGB1P09429 SDHCP2-201ENST00000398565 501 ntBASIC5.48□□□□□ -1.53
HMGB1P09429 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.48□□□□□ -1.53
HMGB1P09429 AL139421.1-201ENST00000423010 169 ntBASIC5.48□□□□□ -1.53
HMGB1P09429 AC104837.2-201ENST00000427236 424 ntBASIC5.48□□□□□ -1.53
HMGB1P09429 AC073335.1-201ENST00000427776 363 ntBASIC5.48□□□□□ -1.53
HMGB1P09429 NEK4P1-201ENST00000433383 879 ntBASIC5.48□□□□□ -1.53
HMGB1P09429 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.48□□□□□ -1.53
HMGB1P09429 RAC1P7-201ENST00000445367 377 ntBASIC5.48□□□□□ -1.53
HMGB1P09429 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HMGB1P09429 AL353691.1-201ENST00000451332 387 ntBASIC5.48□□□□□ -1.53
HMGB1P09429 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGB1P09429 ISCUP1-201ENST00000454451 448 ntBASIC5.48□□□□□ -1.53
HMGB1P09429 NAA50-206ENST00000493454 964 ntTSL 2 BASIC5.48□□□□□ -1.53
HMGB1P09429 AC093278.1-201ENST00000494700 600 ntBASIC5.48□□□□□ -1.53
HMGB1P09429 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGB1P09429 AC105914.1-201ENST00000511798 226 ntBASIC5.48□□□□□ -1.53
HMGB1P09429 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.48□□□□□ -1.53
HMGB1P09429 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGB1P09429 AC090695.1-201ENST00000561269 1222 ntBASIC5.48□□□□□ -1.53
HMGB1P09429 AC009712.1-201ENST00000564938 316 ntBASIC5.48□□□□□ -1.53
HMGB1P09429 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGB1P09429 AC022662.1-201ENST00000580252 331 ntBASIC5.48□□□□□ -1.53
HMGB1P09429 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGB1P09429 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC5.48□□□□□ -1.53
HMGB1P09429 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC5.48□□□□□ -1.53
HMGB1P09429 AC140113.4-201ENST00000622087 222 ntBASIC5.48□□□□□ -1.53
HMGB1P09429 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.48□□□□□ -1.53
HMGB1P09429 ZNF137P-201ENST00000456718 1920 ntBASIC5.48□□□□□ -1.53
HMGB1P09429 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.48□□□□□ -1.53
HMGB1P09429 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGB1P09429 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
HMGB1P09429 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGB1P09429 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGB1P09429 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HMGB1P09429 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.47□□□□□ -1.53
HMGB1P09429 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
HMGB1P09429 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
HMGB1P09429 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGB1P09429 RPL23AP57-201ENST00000332361 466 ntBASIC5.47□□□□□ -1.53
HMGB1P09429 RNU6-328P-201ENST00000390887 106 ntBASIC5.47□□□□□ -1.53
HMGB1P09429 RNU11-4P-201ENST00000391149 133 ntBASIC5.47□□□□□ -1.53
HMGB1P09429 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.47□□□□□ -1.53
HMGB1P09429 RNU4-65P-201ENST00000410473 140 ntBASIC5.47□□□□□ -1.53
HMGB1P09429 TPMTP2-201ENST00000414372 726 ntBASIC5.47□□□□□ -1.53
HMGB1P09429 AC007390.1-201ENST00000415722 356 ntBASIC5.47□□□□□ -1.53
HMGB1P09429 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.47□□□□□ -1.53
HMGB1P09429 SSXP9-201ENST00000417503 292 ntBASIC5.47□□□□□ -1.53
HMGB1P09429 OR2X1P-201ENST00000421144 687 ntBASIC5.47□□□□□ -1.53
HMGB1P09429 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HMGB1P09429 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC5.47□□□□□ -1.53
HMGB1P09429 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.47□□□□□ -1.53
HMGB1P09429 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.47□□□□□ -1.53
HMGB1P09429 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HMGB1P09429 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC5.47□□□□□ -1.53
HMGB1P09429 RPL7P28-201ENST00000437739 740 ntBASIC5.47□□□□□ -1.53
HMGB1P09429 TPTE2P3-201ENST00000441562 1189 ntBASIC5.47□□□□□ -1.53
HMGB1P09429 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.47□□□□□ -1.53
HMGB1P09429 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.47□□□□□ -1.53
HMGB1P09429 AC104763.1-201ENST00000475274 360 ntBASIC5.47□□□□□ -1.53
HMGB1P09429 AC108022.1-201ENST00000493466 478 ntBASIC5.47□□□□□ -1.53
HMGB1P09429 RPS4XP18-201ENST00000495480 763 ntBASIC5.47□□□□□ -1.53
HMGB1P09429 CBX3P3-201ENST00000508108 532 ntBASIC5.47□□□□□ -1.53
HMGB1P09429 OR5D15P-201ENST00000531671 942 ntBASIC5.47□□□□□ -1.53
HMGB1P09429 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HMGB1P09429 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.47□□□□□ -1.53
HMGB1P09429 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC5.47□□□□□ -1.53
HMGB1P09429 AC090615.1-201ENST00000577519 154 ntBASIC5.47□□□□□ -1.53
HMGB1P09429 AC069366.1-201ENST00000583159 838 ntBASIC5.47□□□□□ -1.53
HMGB1P09429 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.47□□□□□ -1.53
HMGB1P09429 AC008966.2-201ENST00000606157 453 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms