Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.5□□□□□ -2.01
CXCL1P09341 MTCO1P8-201ENST00000416914 1523 ntBASIC2.5□□□□□ -2.01
CXCL1P09341 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.5□□□□□ -2.01
CXCL1P09341 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
CXCL1P09341 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.5□□□□□ -2.01
CXCL1P09341 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.5□□□□□ -2.01
CXCL1P09341 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CXCL1P09341 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
CXCL1P09341 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CXCL1P09341 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
CXCL1P09341 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CXCL1P09341 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CXCL1P09341 RNU1-70P-201ENST00000362618 164 ntBASIC2.49□□□□□ -2.01
CXCL1P09341 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CXCL1P09341 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CXCL1P09341 PPIAP31-201ENST00000405422 495 ntBASIC2.49□□□□□ -2.01
CXCL1P09341 HNRNPDP2-201ENST00000406475 478 ntBASIC2.49□□□□□ -2.01
CXCL1P09341 SNORD88.1-201ENST00000408684 91 ntBASIC2.49□□□□□ -2.01
CXCL1P09341 RPL26P29-201ENST00000415623 438 ntBASIC2.49□□□□□ -2.01
CXCL1P09341 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC2.49□□□□□ -2.01
CXCL1P09341 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.49□□□□□ -2.01
CXCL1P09341 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC2.49□□□□□ -2.01
CXCL1P09341 OR4C10P-201ENST00000434991 931 ntBASIC2.49□□□□□ -2.01
CXCL1P09341 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.49□□□□□ -2.01
CXCL1P09341 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC2.49□□□□□ -2.01
CXCL1P09341 RPS26P21-201ENST00000475397 348 ntBASIC2.49□□□□□ -2.01
CXCL1P09341 RN7SL459P-201ENST00000481078 302 ntBASIC2.49□□□□□ -2.01
CXCL1P09341 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC2.49□□□□□ -2.01
CXCL1P09341 GMPSP1-201ENST00000514075 579 ntBASIC2.49□□□□□ -2.01
CXCL1P09341 RN7SKP244-201ENST00000516513 307 ntBASIC2.49□□□□□ -2.01
CXCL1P09341 AP001207.1-201ENST00000524051 481 ntBASIC2.49□□□□□ -2.01
CXCL1P09341 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC2.49□□□□□ -2.01
CXCL1P09341 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.49□□□□□ -2.01
CXCL1P09341 AL163153.1-201ENST00000554223 283 ntBASIC2.49□□□□□ -2.01
CXCL1P09341 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.49□□□□□ -2.01
CXCL1P09341 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.49□□□□□ -2.01
CXCL1P09341 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC2.49□□□□□ -2.01
CXCL1P09341 AC053481.4-201ENST00000583164 216 ntBASIC2.49□□□□□ -2.01
CXCL1P09341 AC006116.10-201ENST00000591836 581 ntBASIC2.49□□□□□ -2.01
CXCL1P09341 AC023043.3-201ENST00000593113 385 ntBASIC2.49□□□□□ -2.01
CXCL1P09341 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.49□□□□□ -2.01
CXCL1P09341 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC2.49□□□□□ -2.01
CXCL1P09341 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.49□□□□□ -2.01
CXCL1P09341 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
CXCL1P09341 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.49□□□□□ -2.01
CXCL1P09341 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC2.49□□□□□ -2.01
CXCL1P09341 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
CXCL1P09341 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CXCL1P09341 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CXCL1P09341 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CXCL1P09341 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.48□□□□□ -2.01
CXCL1P09341 SNORD9-201ENST00000362566 104 ntBASIC2.48□□□□□ -2.01
CXCL1P09341 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CXCL1P09341 AL590004.2-201ENST00000404787 371 ntBASIC2.48□□□□□ -2.01
CXCL1P09341 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CXCL1P09341 TCEA1P4-201ENST00000415066 844 ntBASIC2.48□□□□□ -2.01
CXCL1P09341 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
CXCL1P09341 RPL7P10-201ENST00000417407 739 ntBASIC2.48□□□□□ -2.01
CXCL1P09341 AC244098.2-201ENST00000422068 99 ntBASIC2.48□□□□□ -2.01
CXCL1P09341 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.48□□□□□ -2.01
CXCL1P09341 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CXCL1P09341 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.48□□□□□ -2.01
CXCL1P09341 OR4F13P-201ENST00000428478 931 ntBASIC2.48□□□□□ -2.01
CXCL1P09341 MUPP-201ENST00000438111 566 ntBASIC2.48□□□□□ -2.01
CXCL1P09341 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.48□□□□□ -2.01
CXCL1P09341 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.48□□□□□ -2.01
CXCL1P09341 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.48□□□□□ -2.01
CXCL1P09341 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC2.48□□□□□ -2.01
CXCL1P09341 RPL21P41-201ENST00000459863 264 ntBASIC2.48□□□□□ -2.01
CXCL1P09341 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.48□□□□□ -2.01
CXCL1P09341 RPL21P104-201ENST00000464143 478 ntBASIC2.48□□□□□ -2.01
CXCL1P09341 RN7SL132P-201ENST00000478131 296 ntBASIC2.48□□□□□ -2.01
CXCL1P09341 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.48□□□□□ -2.01
CXCL1P09341 RPL9P33-201ENST00000484311 566 ntBASIC2.48□□□□□ -2.01
CXCL1P09341 NCOR1P1-202ENST00000486162 291 ntBASIC2.48□□□□□ -2.01
CXCL1P09341 VN1R105P-201ENST00000486595 910 ntBASIC2.48□□□□□ -2.01
CXCL1P09341 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC2.48□□□□□ -2.01
CXCL1P09341 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.48□□□□□ -2.01
CXCL1P09341 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.48□□□□□ -2.01
CXCL1P09341 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.48□□□□□ -2.01
CXCL1P09341 MTND4LP22-201ENST00000508209 276 ntBASIC2.48□□□□□ -2.01
CXCL1P09341 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.48□□□□□ -2.01
CXCL1P09341 MIR2116-201ENST00000517221 80 ntBASIC2.48□□□□□ -2.01
CXCL1P09341 SEC11B-201ENST00000518383 499 ntBASIC2.48□□□□□ -2.01
CXCL1P09341 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.48□□□□□ -2.01
CXCL1P09341 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.48□□□□□ -2.01
CXCL1P09341 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC2.48□□□□□ -2.01
CXCL1P09341 CR383656.6-201ENST00000550518 394 ntBASIC2.48□□□□□ -2.01
CXCL1P09341 PARP1P2-201ENST00000556806 195 ntBASIC2.48□□□□□ -2.01
CXCL1P09341 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.48□□□□□ -2.01
CXCL1P09341 AC015917.1-201ENST00000579654 510 ntBASIC2.48□□□□□ -2.01
CXCL1P09341 MIR4286-201ENST00000580651 93 ntBASIC2.48□□□□□ -2.01
CXCL1P09341 AC245128.3-201ENST00000594721 748 ntBASIC2.48□□□□□ -2.01
CXCL1P09341 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CXCL1P09341 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.48□□□□□ -2.01
CXCL1P09341 U3.45-201ENST00000607547 219 ntBASIC2.48□□□□□ -2.01
CXCL1P09341 AL356321.1-201ENST00000621360 228 ntBASIC2.48□□□□□ -2.01
CXCL1P09341 U4.6-201ENST00000621618 127 ntBASIC2.48□□□□□ -2.01
CXCL1P09341 AC010435.1-201ENST00000623353 1177 ntBASIC2.48□□□□□ -2.01
CXCL1P09341 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms