Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 RN7SKP18-201ENST00000516005 275 ntBASIC3.68□□□□□ -1.82
TPM3P06753 RNU6-1004P-201ENST00000516584 111 ntBASIC3.68□□□□□ -1.82
TPM3P06753 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC3.68□□□□□ -1.82
TPM3P06753 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.68□□□□□ -1.82
TPM3P06753 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.68□□□□□ -1.82
TPM3P06753 PARP1P2-201ENST00000556806 195 ntBASIC3.68□□□□□ -1.82
TPM3P06753 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.68□□□□□ -1.82
TPM3P06753 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.68□□□□□ -1.82
TPM3P06753 AC006023.2-201ENST00000609916 167 ntBASIC3.68□□□□□ -1.82
TPM3P06753 uc_338.1-201ENST00000612113 180 ntBASIC3.68□□□□□ -1.82
TPM3P06753 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.68□□□□□ -1.82
TPM3P06753 AC245389.2-201ENST00000616023 576 ntBASIC3.68□□□□□ -1.82
TPM3P06753 ZYXP1-201ENST00000617638 118 ntBASIC3.68□□□□□ -1.82
TPM3P06753 AC243756.2-201ENST00000618406 463 ntBASIC3.68□□□□□ -1.82
TPM3P06753 AC242843.1-201ENST00000618702 573 ntBASIC3.68□□□□□ -1.82
TPM3P06753 AL590240.3-201ENST00000621416 943 ntBASIC3.68□□□□□ -1.82
TPM3P06753 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.68□□□□□ -1.82
TPM3P06753 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
TPM3P06753 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TPM3P06753 MTND5P24-201ENST00000438892 1767 ntBASIC3.68□□□□□ -1.82
TPM3P06753 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
TPM3P06753 AL645937.1-201ENST00000641739 1652 ntBASIC3.68□□□□□ -1.82
TPM3P06753 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
TPM3P06753 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.67□□□□□ -1.82
TPM3P06753 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.67□□□□□ -1.82
TPM3P06753 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.67□□□□□ -1.82
TPM3P06753 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.67□□□□□ -1.82
TPM3P06753 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
TPM3P06753 SNORA7.2-201ENST00000364446 145 ntBASIC3.67□□□□□ -1.82
TPM3P06753 SNORA51.2-201ENST00000364595 132 ntBASIC3.67□□□□□ -1.82
TPM3P06753 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TPM3P06753 RNA5SP344-201ENST00000411081 104 ntBASIC3.67□□□□□ -1.82
TPM3P06753 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.67□□□□□ -1.82
TPM3P06753 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.67□□□□□ -1.82
TPM3P06753 RPL21P40-201ENST00000428586 483 ntBASIC3.67□□□□□ -1.82
TPM3P06753 NDUFA5P10-201ENST00000432147 357 ntBASIC3.67□□□□□ -1.82
TPM3P06753 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.67□□□□□ -1.82
TPM3P06753 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.67□□□□□ -1.82
TPM3P06753 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.67□□□□□ -1.82
TPM3P06753 AC147055.1-201ENST00000509261 750 ntBASIC3.67□□□□□ -1.82
TPM3P06753 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.67□□□□□ -1.82
TPM3P06753 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC3.67□□□□□ -1.82
TPM3P06753 APOOP4-201ENST00000513530 597 ntBASIC3.67□□□□□ -1.82
TPM3P06753 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.67□□□□□ -1.82
TPM3P06753 RN7SKP43-201ENST00000516173 320 ntBASIC3.67□□□□□ -1.82
TPM3P06753 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.67□□□□□ -1.82
TPM3P06753 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.67□□□□□ -1.82
TPM3P06753 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC3.67□□□□□ -1.82
TPM3P06753 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.67□□□□□ -1.82
TPM3P06753 RN7SL703P-201ENST00000578485 302 ntBASIC3.67□□□□□ -1.82
TPM3P06753 AC099676.1-201ENST00000608886 657 ntBASIC3.67□□□□□ -1.82
TPM3P06753 AC091903.1-201ENST00000624322 454 ntBASIC3.67□□□□□ -1.82
TPM3P06753 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TPM3P06753 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
TPM3P06753 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.66□□□□□ -1.82
TPM3P06753 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TPM3P06753 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.66□□□□□ -1.82
TPM3P06753 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
TPM3P06753 RPL32P3-201ENST00000359025 275 ntBASIC3.66□□□□□ -1.82
TPM3P06753 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.66□□□□□ -1.82
TPM3P06753 AL354719.1-201ENST00000406535 843 ntBASIC3.66□□□□□ -1.82
TPM3P06753 AL031121.1-201ENST00000406553 254 ntBASIC3.66□□□□□ -1.82
TPM3P06753 RPL26P37-201ENST00000411983 438 ntBASIC3.66□□□□□ -1.82
TPM3P06753 RPL7P2-201ENST00000427639 268 ntBASIC3.66□□□□□ -1.82
TPM3P06753 MED6P1-201ENST00000439659 713 ntBASIC3.66□□□□□ -1.82
TPM3P06753 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.66□□□□□ -1.82
TPM3P06753 GAPDHP27-201ENST00000447427 1020 ntBASIC3.66□□□□□ -1.82
TPM3P06753 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.66□□□□□ -1.82
TPM3P06753 AC073387.1-201ENST00000453261 709 ntBASIC3.66□□□□□ -1.82
TPM3P06753 NDUFA5P9-201ENST00000472609 340 ntBASIC3.66□□□□□ -1.82
TPM3P06753 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.66□□□□□ -1.82
TPM3P06753 SNORA70.17-201ENST00000516449 133 ntBASIC3.66□□□□□ -1.82
TPM3P06753 SNORA31.26-201ENST00000517250 137 ntBASIC3.66□□□□□ -1.82
TPM3P06753 AC067904.2-201ENST00000517322 1283 ntBASIC3.66□□□□□ -1.82
TPM3P06753 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.66□□□□□ -1.82
TPM3P06753 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.66□□□□□ -1.82
TPM3P06753 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.66□□□□□ -1.82
TPM3P06753 AC107982.3-201ENST00000584957 985 ntBASIC3.66□□□□□ -1.82
TPM3P06753 PCNAP1-202ENST00000595299 752 ntBASIC3.66□□□□□ -1.82
TPM3P06753 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.66□□□□□ -1.82
TPM3P06753 RNA5SP196-201ENST00000625967 102 ntBASIC3.66□□□□□ -1.82
TPM3P06753 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TPM3P06753 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.66□□□□□ -1.82
TPM3P06753 AC004925.1-201ENST00000624256 2706 ntBASIC3.65□□□□□ -1.82
TPM3P06753 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.65□□□□□ -1.82
TPM3P06753 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
TPM3P06753 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TPM3P06753 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
TPM3P06753 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TPM3P06753 AL035423.1-201ENST00000420331 213 ntBASIC3.65□□□□□ -1.83
TPM3P06753 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.65□□□□□ -1.83
TPM3P06753 AC093151.1-201ENST00000427711 313 ntBASIC3.65□□□□□ -1.83
TPM3P06753 CYCSP4-201ENST00000429682 331 ntBASIC3.65□□□□□ -1.83
TPM3P06753 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.65□□□□□ -1.83
TPM3P06753 RPS29P7-201ENST00000439662 171 ntBASIC3.65□□□□□ -1.83
TPM3P06753 SSXP4-201ENST00000451349 245 ntBASIC3.65□□□□□ -1.83
TPM3P06753 HMGB1P26-201ENST00000452520 628 ntBASIC3.65□□□□□ -1.83
TPM3P06753 C1DP3-201ENST00000455013 423 ntBASIC3.65□□□□□ -1.83
TPM3P06753 RPS26P21-201ENST00000475397 348 ntBASIC3.65□□□□□ -1.83
TPM3P06753 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 174.5 ms