Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 SNORA56-201ENST00000383966 129 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 RNU6-932P-201ENST00000391108 106 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 AL583834.1-201ENST00000406943 343 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 GTF2IP23-201ENST00000423746 351 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 UBE2V1P1-201ENST00000430836 445 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 BTF3P10-201ENST00000433415 495 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 TRIM60P9Y-201ENST00000438459 816 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 RPL23AP33-201ENST00000442301 452 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 TRIM60P11Y-201ENST00000445313 801 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 NUTF2P3-201ENST00000448540 384 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 RPS15AP1-201ENST00000457423 391 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 HMGN1P18-201ENST00000457642 277 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 SNRPGP3-201ENST00000469405 227 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 GAPDHP36-201ENST00000480688 918 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 AL132838.2-201ENST00000492041 314 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 NAMPTP2-201ENST00000505629 1115 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 PTGES3P3-201ENST00000511479 482 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 AC093755.1-201ENST00000512950 1023 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 HIGD1AP3-201ENST00000515857 278 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 SNORA64.4-201ENST00000516632 81 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 RNU4-60P-201ENST00000517239 135 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 NAT2-202ENST00000520116 716 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 HIGD1AP6-201ENST00000521833 279 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 MTND1P36-201ENST00000522384 936 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 HIGD1AP10-201ENST00000527837 282 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 OR8L1P-201ENST00000534005 955 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 AC092451.2-201ENST00000538746 658 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 UBE2NP1-201ENST00000545592 458 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 NIFKP8-201ENST00000560500 874 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 MIR3939-201ENST00000582614 106 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 AC007687.1-201ENST00000602704 304 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 AL161729.3-201ENST00000603533 673 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 TEX41-238ENST00000604253 709 ntTSL 5 BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 HSPE1P14-201ENST00000605812 302 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 AL445423.1-201ENST00000609941 536 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 AC006338.2-201ENST00000616864 791 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 AC121761.2-201ENST00000617300 689 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 MIR3653-201ENST00000625572 110 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 AL121594.5-201ENST00000631724 573 ntBASIC2.76□□□□□ -1.97
HLA-DQA1P01909 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC2.76□□□□□ -1.97
HLA-DQA1P01909 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 AC007823.1-201ENST00000569932 1566 ntBASIC2.75□□□□□ -1.97
HLA-DQA1P01909 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 RNU6-353P-201ENST00000364266 108 ntBASIC2.75□□□□□ -1.97
HLA-DQA1P01909 RNA5SP42-201ENST00000364278 115 ntBASIC2.75□□□□□ -1.97
HLA-DQA1P01909 RNU6-207P-201ENST00000384137 107 ntBASIC2.75□□□□□ -1.97
HLA-DQA1P01909 RNU11-4P-201ENST00000391149 133 ntBASIC2.75□□□□□ -1.97
HLA-DQA1P01909 PTMAP5-201ENST00000393073 333 ntBASIC2.75□□□□□ -1.97
HLA-DQA1P01909 AL161909.1-201ENST00000397390 712 ntBASIC2.75□□□□□ -1.97
HLA-DQA1P01909 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 HMGB3P23-201ENST00000414981 585 ntBASIC2.75□□□□□ -1.97
HLA-DQA1P01909 AC007390.1-201ENST00000415722 356 ntBASIC2.75□□□□□ -1.97
HLA-DQA1P01909 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 AC241520.1-201ENST00000422654 1099 ntBASIC2.75□□□□□ -1.97
HLA-DQA1P01909 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 FAR2P4-202ENST00000425399 584 ntBASIC2.75□□□□□ -1.97
HLA-DQA1P01909 GAS5-208ENST00000425771 242 ntTSL 3 BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 AC000041.1-201ENST00000439655 175 ntBASIC2.75□□□□□ -1.97
HLA-DQA1P01909 Z77249.1-201ENST00000444622 1175 ntBASIC2.75□□□□□ -1.97
HLA-DQA1P01909 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.75□□□□□ -1.97
HLA-DQA1P01909 AC092451.1-201ENST00000480211 153 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms