Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC083875.1-201ENST00000419509 405 ntBASIC4.75□□□□□ -1.65
VPS4BO75351 RGS17P1-201ENST00000423358 553 ntBASIC4.75□□□□□ -1.65
VPS4BO75351 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.75□□□□□ -1.65
VPS4BO75351 AC010975.2-201ENST00000427781 588 ntBASIC4.75□□□□□ -1.65
VPS4BO75351 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.75□□□□□ -1.65
VPS4BO75351 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.75□□□□□ -1.65
VPS4BO75351 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS4BO75351 YWHAZP8-201ENST00000436935 731 ntBASIC4.75□□□□□ -1.65
VPS4BO75351 AC004938.1-201ENST00000438468 308 ntBASIC4.75□□□□□ -1.65
VPS4BO75351 AL031667.1-201ENST00000440222 725 ntBASIC4.75□□□□□ -1.65
VPS4BO75351 RPL39P6-201ENST00000448289 150 ntBASIC4.75□□□□□ -1.65
VPS4BO75351 AC073264.2-201ENST00000448886 166 ntBASIC4.75□□□□□ -1.65
VPS4BO75351 TCEA1P1-201ENST00000449716 880 ntBASIC4.75□□□□□ -1.65
VPS4BO75351 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS4BO75351 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.75□□□□□ -1.65
VPS4BO75351 OR4G11P-201ENST00000492842 939 ntBASIC4.75□□□□□ -1.65
VPS4BO75351 RN7SL244P-201ENST00000493405 297 ntBASIC4.75□□□□□ -1.65
VPS4BO75351 AC140172.1-201ENST00000502928 141 ntBASIC4.75□□□□□ -1.65
VPS4BO75351 AC114981.1-201ENST00000503897 678 ntBASIC4.75□□□□□ -1.65
VPS4BO75351 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS4BO75351 RPL37P25-201ENST00000507308 276 ntBASIC4.75□□□□□ -1.65
VPS4BO75351 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.75□□□□□ -1.65
VPS4BO75351 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.75□□□□□ -1.65
VPS4BO75351 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.75□□□□□ -1.65
VPS4BO75351 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.75□□□□□ -1.65
VPS4BO75351 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS4BO75351 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS4BO75351 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS4BO75351 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS4BO75351 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.75□□□□□ -1.65
VPS4BO75351 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.75□□□□□ -1.65
VPS4BO75351 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.75□□□□□ -1.65
VPS4BO75351 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.75□□□□□ -1.65
VPS4BO75351 AC233702.9-201ENST00000581528 203 ntBASIC4.75□□□□□ -1.65
VPS4BO75351 MIR4737-201ENST00000583979 81 ntBASIC4.75□□□□□ -1.65
VPS4BO75351 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.75□□□□□ -1.65
VPS4BO75351 AC115286.1-201ENST00000604298 434 ntBASIC4.75□□□□□ -1.65
VPS4BO75351 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.75□□□□□ -1.65
VPS4BO75351 MIR6758-201ENST00000620653 63 ntBASIC4.75□□□□□ -1.65
VPS4BO75351 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.75□□□□□ -1.65
VPS4BO75351 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.75□□□□□ -1.65
VPS4BO75351 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VPS4BO75351 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS4BO75351 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
VPS4BO75351 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.75□□□□□ -1.65
VPS4BO75351 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
VPS4BO75351 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
VPS4BO75351 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.75□□□□□ -1.65
VPS4BO75351 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
VPS4BO75351 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS4BO75351 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VPS4BO75351 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
VPS4BO75351 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS4BO75351 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
VPS4BO75351 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.74□□□□□ -1.65
VPS4BO75351 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
VPS4BO75351 RN7SKP95-201ENST00000362860 303 ntBASIC4.74□□□□□ -1.65
VPS4BO75351 RNU6-348P-201ENST00000384386 107 ntBASIC4.74□□□□□ -1.65
VPS4BO75351 VN1R8P-201ENST00000407739 893 ntBASIC4.74□□□□□ -1.65
VPS4BO75351 RPL17P12-201ENST00000413391 526 ntBASIC4.74□□□□□ -1.65
VPS4BO75351 RPL21P32-201ENST00000419877 477 ntBASIC4.74□□□□□ -1.65
VPS4BO75351 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.74□□□□□ -1.65
VPS4BO75351 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VPS4BO75351 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS4BO75351 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.74□□□□□ -1.65
VPS4BO75351 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS4BO75351 DNAJC19P1-201ENST00000455312 319 ntBASIC4.74□□□□□ -1.65
VPS4BO75351 RN7SL558P-201ENST00000497468 299 ntBASIC4.74□□□□□ -1.65
VPS4BO75351 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.74□□□□□ -1.65
VPS4BO75351 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.74□□□□□ -1.65
VPS4BO75351 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VPS4BO75351 OR7H2P-201ENST00000513483 306 ntBASIC4.74□□□□□ -1.65
VPS4BO75351 AC116347.2-201ENST00000514912 523 ntBASIC4.74□□□□□ -1.65
VPS4BO75351 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
VPS4BO75351 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS4BO75351 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.74□□□□□ -1.65
VPS4BO75351 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.74□□□□□ -1.65
VPS4BO75351 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS4BO75351 BGLT3-201ENST00000564523 994 ntBASIC4.74□□□□□ -1.65
VPS4BO75351 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.74□□□□□ -1.65
VPS4BO75351 UBE2FP2-201ENST00000566646 462 ntBASIC4.74□□□□□ -1.65
VPS4BO75351 MTND1P15-201ENST00000579262 949 ntBASIC4.74□□□□□ -1.65
VPS4BO75351 SNORA74C-1-201ENST00000580726 201 ntBASIC4.74□□□□□ -1.65
VPS4BO75351 AC209154.1-201ENST00000582156 337 ntBASIC4.74□□□□□ -1.65
VPS4BO75351 MIR4637-201ENST00000582405 84 ntBASIC4.74□□□□□ -1.65
VPS4BO75351 AC005771.1-201ENST00000585581 349 ntBASIC4.74□□□□□ -1.65
VPS4BO75351 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.74□□□□□ -1.65
VPS4BO75351 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.74□□□□□ -1.65
VPS4BO75351 AC068790.4-201ENST00000602474 263 ntBASIC4.74□□□□□ -1.65
VPS4BO75351 AC105254.2-201ENST00000603636 436 ntBASIC4.74□□□□□ -1.65
VPS4BO75351 AC090186.1-201ENST00000605991 572 ntBASIC4.74□□□□□ -1.65
VPS4BO75351 AC019193.2-201ENST00000610012 634 ntBASIC4.74□□□□□ -1.65
VPS4BO75351 AC078899.5-201ENST00000612475 178 ntBASIC4.74□□□□□ -1.65
VPS4BO75351 AC083809.1-201ENST00000615051 472 ntBASIC4.74□□□□□ -1.65
VPS4BO75351 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
VPS4BO75351 TEX21P-201ENST00000447107 1476 ntBASIC4.74□□□□□ -1.65
VPS4BO75351 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VPS4BO75351 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
VPS4BO75351 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS4BO75351 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms