Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 FGF7P2-201ENST00000332473 296 ntBASIC4.7□□□□□ -1.66
PHGDHO43175 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PHGDHO43175 RNU4-75P-201ENST00000364621 146 ntBASIC4.7□□□□□ -1.66
PHGDHO43175 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PHGDHO43175 RNU6-878P-201ENST00000384578 110 ntBASIC4.7□□□□□ -1.66
PHGDHO43175 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PHGDHO43175 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.7□□□□□ -1.66
PHGDHO43175 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PHGDHO43175 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.7□□□□□ -1.66
PHGDHO43175 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.7□□□□□ -1.66
PHGDHO43175 RPS7P13-201ENST00000413955 498 ntBASIC4.7□□□□□ -1.66
PHGDHO43175 MTATP6P27-201ENST00000416987 621 ntBASIC4.7□□□□□ -1.66
PHGDHO43175 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.7□□□□□ -1.66
PHGDHO43175 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.7□□□□□ -1.66
PHGDHO43175 AC093162.1-201ENST00000419682 124 ntBASIC4.7□□□□□ -1.66
PHGDHO43175 AC012065.2-201ENST00000421295 375 ntBASIC4.7□□□□□ -1.66
PHGDHO43175 RAD23BP1-201ENST00000421404 1227 ntBASIC4.7□□□□□ -1.66
PHGDHO43175 MTCO2P5-201ENST00000422621 426 ntBASIC4.7□□□□□ -1.66
PHGDHO43175 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PHGDHO43175 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.7□□□□□ -1.66
PHGDHO43175 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PHGDHO43175 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PHGDHO43175 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.7□□□□□ -1.66
PHGDHO43175 AC127537.2-201ENST00000439258 465 ntBASIC4.7□□□□□ -1.66
PHGDHO43175 AL138878.2-201ENST00000440581 1241 ntBASIC4.7□□□□□ -1.66
PHGDHO43175 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.7□□□□□ -1.66
PHGDHO43175 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.7□□□□□ -1.66
PHGDHO43175 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.7□□□□□ -1.66
PHGDHO43175 USP9YP29-201ENST00000445112 563 ntBASIC4.7□□□□□ -1.66
PHGDHO43175 SLC25A18P1-201ENST00000449385 454 ntBASIC4.7□□□□□ -1.66
PHGDHO43175 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.7□□□□□ -1.66
PHGDHO43175 RN7SL727P-201ENST00000482164 296 ntBASIC4.7□□□□□ -1.66
PHGDHO43175 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.7□□□□□ -1.66
PHGDHO43175 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.7□□□□□ -1.66
PHGDHO43175 AC006499.3-201ENST00000506077 748 ntBASIC4.7□□□□□ -1.66
PHGDHO43175 AC091868.1-201ENST00000508746 304 ntBASIC4.7□□□□□ -1.66
PHGDHO43175 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.7□□□□□ -1.66
PHGDHO43175 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.7□□□□□ -1.66
PHGDHO43175 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.7□□□□□ -1.66
PHGDHO43175 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.7□□□□□ -1.66
PHGDHO43175 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.7□□□□□ -1.66
PHGDHO43175 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.7□□□□□ -1.66
PHGDHO43175 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.7□□□□□ -1.66
PHGDHO43175 HAUS8P1-201ENST00000549005 542 ntBASIC4.7□□□□□ -1.66
PHGDHO43175 CR383656.6-201ENST00000550518 394 ntBASIC4.7□□□□□ -1.66
PHGDHO43175 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.7□□□□□ -1.66
PHGDHO43175 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.7□□□□□ -1.66
PHGDHO43175 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.7□□□□□ -1.66
PHGDHO43175 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.7□□□□□ -1.66
PHGDHO43175 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.7□□□□□ -1.66
PHGDHO43175 AC053481.3-201ENST00000577881 843 ntBASIC4.7□□□□□ -1.66
PHGDHO43175 MIR5699-201ENST00000578903 90 ntBASIC4.7□□□□□ -1.66
PHGDHO43175 AP001180.3-201ENST00000582221 145 ntBASIC4.7□□□□□ -1.66
PHGDHO43175 AC022726.1-201ENST00000587475 207 ntBASIC4.7□□□□□ -1.66
PHGDHO43175 AC068790.2-201ENST00000602601 557 ntBASIC4.7□□□□□ -1.66
PHGDHO43175 AC103792.1-201ENST00000603591 919 ntBASIC4.7□□□□□ -1.66
PHGDHO43175 AP001521.2-201ENST00000608772 546 ntBASIC4.7□□□□□ -1.66
PHGDHO43175 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.7□□□□□ -1.66
PHGDHO43175 AL121612.2-201ENST00000612261 482 ntBASIC4.7□□□□□ -1.66
PHGDHO43175 AC004009.2-201ENST00000623016 728 ntBASIC4.7□□□□□ -1.66
PHGDHO43175 AL356121.2-201ENST00000624715 780 ntBASIC4.7□□□□□ -1.66
PHGDHO43175 AP000843.1-201ENST00000624880 701 ntBASIC4.7□□□□□ -1.66
PHGDHO43175 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.7□□□□□ -1.66
PHGDHO43175 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.7□□□□□ -1.66
PHGDHO43175 AC093591.3-201ENST00000634516 308 ntBASIC4.7□□□□□ -1.66
PHGDHO43175 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PHGDHO43175 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PHGDHO43175 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
PHGDHO43175 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.7□□□□□ -1.66
PHGDHO43175 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.7□□□□□ -1.66
PHGDHO43175 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PHGDHO43175 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.7□□□□□ -1.66
PHGDHO43175 OR11H5P-202ENST00000641612 1325 ntBASIC4.7□□□□□ -1.66
PHGDHO43175 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PHGDHO43175 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
PHGDHO43175 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PHGDHO43175 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.69□□□□□ -1.66
PHGDHO43175 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.69□□□□□ -1.66
PHGDHO43175 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
PHGDHO43175 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PHGDHO43175 ZNF33CP-201ENST00000432492 2030 ntBASIC4.69□□□□□ -1.66
PHGDHO43175 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.69□□□□□ -1.66
PHGDHO43175 ZNF734P-201ENST00000419494 1534 ntBASIC4.69□□□□□ -1.66
PHGDHO43175 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PHGDHO43175 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PHGDHO43175 MIR765-201ENST00000390226 114 ntBASIC4.69□□□□□ -1.66
PHGDHO43175 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PHGDHO43175 AL590762.2-201ENST00000395798 571 ntBASIC4.69□□□□□ -1.66
PHGDHO43175 RNU4-34P-201ENST00000410431 124 ntBASIC4.69□□□□□ -1.66
PHGDHO43175 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.69□□□□□ -1.66
PHGDHO43175 UBTFL3-201ENST00000418934 1024 ntBASIC4.69□□□□□ -1.66
PHGDHO43175 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.69□□□□□ -1.66
PHGDHO43175 PSMA6P3-201ENST00000428242 164 ntBASIC4.69□□□□□ -1.66
PHGDHO43175 MUPP-201ENST00000438111 566 ntBASIC4.69□□□□□ -1.66
PHGDHO43175 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.69□□□□□ -1.66
PHGDHO43175 AC112498.1-201ENST00000444401 332 ntBASIC4.69□□□□□ -1.66
PHGDHO43175 AC073587.1-201ENST00000447093 876 ntBASIC4.69□□□□□ -1.66
PHGDHO43175 AC239367.2-201ENST00000447309 705 ntBASIC4.69□□□□□ -1.66
PHGDHO43175 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.69□□□□□ -1.66
PHGDHO43175 AC104651.2-201ENST00000447549 528 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms