Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 MTND2P6-201ENST00000455337 1030 ntBASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC010401.1-201ENST00000463867 348 ntBASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC108729.2-201ENST00000476543 840 ntBASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 NPM1P17-201ENST00000479221 602 ntBASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 AL049830.2-201ENST00000480072 201 ntBASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 AP000563.1-201ENST00000490865 758 ntBASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 GMPSP1-201ENST00000514075 579 ntBASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 RNU2-27P-201ENST00000516185 142 ntBASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 RN7SKP60-201ENST00000516985 239 ntBASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 RN7SKP57-201ENST00000517248 293 ntBASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC103833.1-201ENST00000517442 172 ntBASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 MIR3908-201ENST00000579798 126 ntBASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 MIR4512-201ENST00000583257 77 ntBASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC008507.1-201ENST00000587506 734 ntBASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 AL671309.1-201ENST00000603750 544 ntBASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC005000.2-201ENST00000605468 310 ntBASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 MFSD8-233ENST00000641482 4860 ntBASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 AL359715.4-201ENST00000606629 1436 ntBASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TMX2-CTNND1H3BSU7 AL513302.2-201ENST00000562313 1842 ntBASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 SNORD115-48-201ENST00000364764 76 ntBASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 AL356057.1-202ENST00000402263 756 ntBASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 HMGB1P13-201ENST00000406019 642 ntBASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 RN7SKP111-201ENST00000410349 271 ntBASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 LIPT1P1-201ENST00000415870 1186 ntBASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 RPL23AP4-201ENST00000427757 463 ntBASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 MRPS18BP2-201ENST00000434310 759 ntBASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 AP000949.1-201ENST00000438328 629 ntBASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 MTND2P30-201ENST00000456663 382 ntBASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 BX510359.1-201ENST00000456973 237 ntBASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 RPS4XP2-201ENST00000458402 793 ntBASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 RPL6P9-201ENST00000466502 859 ntBASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 RPL23AP12-201ENST00000467573 473 ntBASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 RN7SL442P-201ENST00000473804 320 ntBASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 RPS29P2-201ENST00000479278 136 ntBASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 TMED11P-201ENST00000479478 690 ntBASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC021146.5-201ENST00000503544 545 ntBASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 RNU6-1102P-201ENST00000516149 96 ntBASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 HMGB1P46-201ENST00000520062 610 ntBASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC087888.1-201ENST00000550884 1254 ntBASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC023158.1-201ENST00000561632 1025 ntBASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 KLKP1-201ENST00000595979 403 ntBASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC006557.5-201ENST00000603126 811 ntBASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 AP000720.1-201ENST00000625091 483 ntBASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.42□□□□□ -1.86
TMX2-CTNND1H3BSU7 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
TMX2-CTNND1H3BSU7 USP8P1-201ENST00000494673 3183 ntBASIC3.41□□□□□ -1.86
TMX2-CTNND1H3BSU7 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
TMX2-CTNND1H3BSU7 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.41□□□□□ -1.86
TMX2-CTNND1H3BSU7 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.41□□□□□ -1.86
TMX2-CTNND1H3BSU7 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TMX2-CTNND1H3BSU7 AL136131.1-201ENST00000406079 803 ntBASIC3.41□□□□□ -1.86
TMX2-CTNND1H3BSU7 RNU2-72P-201ENST00000411175 163 ntBASIC3.41□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC096664.2-201ENST00000411843 406 ntBASIC3.41□□□□□ -1.86
TMX2-CTNND1H3BSU7 RPL26P37-201ENST00000411983 438 ntBASIC3.41□□□□□ -1.86
TMX2-CTNND1H3BSU7 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.41□□□□□ -1.86
TMX2-CTNND1H3BSU7 RNU6-579P-201ENST00000516879 102 ntBASIC3.41□□□□□ -1.86
TMX2-CTNND1H3BSU7 HAUS1P3-201ENST00000523909 662 ntBASIC3.41□□□□□ -1.86
TMX2-CTNND1H3BSU7 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
TMX2-CTNND1H3BSU7 AP003049.1-201ENST00000529418 457 ntBASIC3.41□□□□□ -1.86
TMX2-CTNND1H3BSU7 AC008011.1-201ENST00000545989 227 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms