Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC29.2■■■□□ 2.27
CDC42BPBQ9Y5S2 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC29.2■■■□□ 2.27
CDC42BPBQ9Y5S2 RN7SL510P-201ENST00000581311 263 ntBASIC29.2■■■□□ 2.27
CDC42BPBQ9Y5S2 IFNL4P1-201ENST00000607083 540 ntBASIC29.2■■■□□ 2.27
CDC42BPBQ9Y5S2 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC29.2■■■□□ 2.27
CDC42BPBQ9Y5S2 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
CDC42BPBQ9Y5S2 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
CDC42BPBQ9Y5S2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.27
CDC42BPBQ9Y5S2 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC29.2■■■□□ 2.27
CDC42BPBQ9Y5S2 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC29.2■■■□□ 2.27
CDC42BPBQ9Y5S2 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.26
CDC42BPBQ9Y5S2 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC29.2■■■□□ 2.26
CDC42BPBQ9Y5S2 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
CDC42BPBQ9Y5S2 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC29.2■■■□□ 2.26
CDC42BPBQ9Y5S2 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
CDC42BPBQ9Y5S2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.26
CDC42BPBQ9Y5S2 KRT8P10-201ENST00000450021 1447 ntBASIC29.2■■■□□ 2.26
CDC42BPBQ9Y5S2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC29.2■■■□□ 2.26
CDC42BPBQ9Y5S2 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
CDC42BPBQ9Y5S2 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
CDC42BPBQ9Y5S2 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
CDC42BPBQ9Y5S2 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC29.2■■■□□ 2.26
CDC42BPBQ9Y5S2 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
CDC42BPBQ9Y5S2 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC29.19■■■□□ 2.26
CDC42BPBQ9Y5S2 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CDC42BPBQ9Y5S2 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
CDC42BPBQ9Y5S2 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CDC42BPBQ9Y5S2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC29.19■■■□□ 2.26
CDC42BPBQ9Y5S2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
CDC42BPBQ9Y5S2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CDC42BPBQ9Y5S2 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
CDC42BPBQ9Y5S2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
CDC42BPBQ9Y5S2 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CDC42BPBQ9Y5S2 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC29.19■■■□□ 2.26
CDC42BPBQ9Y5S2 AC111152.3-201ENST00000569699 673 ntBASIC29.19■■■□□ 2.26
CDC42BPBQ9Y5S2 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CDC42BPBQ9Y5S2 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC29.19■■■□□ 2.26
CDC42BPBQ9Y5S2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
CDC42BPBQ9Y5S2 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC29.18■■■□□ 2.26
CDC42BPBQ9Y5S2 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC29.18■■■□□ 2.26
CDC42BPBQ9Y5S2 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CDC42BPBQ9Y5S2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
CDC42BPBQ9Y5S2 SEC1P-202ENST00000473944 940 ntBASIC29.18■■■□□ 2.26
CDC42BPBQ9Y5S2 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC29.18■■■□□ 2.26
CDC42BPBQ9Y5S2 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC29.18■■■□□ 2.26
CDC42BPBQ9Y5S2 AL691432.3-201ENST00000621860 400 ntBASIC29.18■■■□□ 2.26
CDC42BPBQ9Y5S2 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
CDC42BPBQ9Y5S2 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC29.18■■■□□ 2.26
CDC42BPBQ9Y5S2 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CDC42BPBQ9Y5S2 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC29.18■■■□□ 2.26
CDC42BPBQ9Y5S2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC29.18■■■□□ 2.26
CDC42BPBQ9Y5S2 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CDC42BPBQ9Y5S2 AL162377.1-201ENST00000618844 1793 ntBASIC29.17■■■□□ 2.26
CDC42BPBQ9Y5S2 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC29.17■■■□□ 2.26
CDC42BPBQ9Y5S2 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CDC42BPBQ9Y5S2 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CDC42BPBQ9Y5S2 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CDC42BPBQ9Y5S2 AP002383.4-201ENST00000442518 975 ntBASIC29.17■■■□□ 2.26
CDC42BPBQ9Y5S2 FDX1P1-201ENST00000449115 551 ntBASIC29.17■■■□□ 2.26
CDC42BPBQ9Y5S2 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC29.17■■■□□ 2.26
CDC42BPBQ9Y5S2 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
CDC42BPBQ9Y5S2 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
CDC42BPBQ9Y5S2 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CDC42BPBQ9Y5S2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC29.17■■■□□ 2.26
CDC42BPBQ9Y5S2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC29.17■■■□□ 2.26
CDC42BPBQ9Y5S2 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CDC42BPBQ9Y5S2 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC29.17■■■□□ 2.26
CDC42BPBQ9Y5S2 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
CDC42BPBQ9Y5S2 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC29.17■■■□□ 2.26
CDC42BPBQ9Y5S2 PRELID1P1-202ENST00000567272 903 ntBASIC29.17■■■□□ 2.26
CDC42BPBQ9Y5S2 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
CDC42BPBQ9Y5S2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
CDC42BPBQ9Y5S2 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CDC42BPBQ9Y5S2 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC29.16■■■□□ 2.26
CDC42BPBQ9Y5S2 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CDC42BPBQ9Y5S2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC29.16■■■□□ 2.26
CDC42BPBQ9Y5S2 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
CDC42BPBQ9Y5S2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC29.16■■■□□ 2.26
CDC42BPBQ9Y5S2 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
CDC42BPBQ9Y5S2 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CDC42BPBQ9Y5S2 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC29.16■■■□□ 2.26
CDC42BPBQ9Y5S2 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC29.16■■■□□ 2.26
CDC42BPBQ9Y5S2 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC29.16■■■□□ 2.26
CDC42BPBQ9Y5S2 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CDC42BPBQ9Y5S2 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC29.16■■■□□ 2.26
CDC42BPBQ9Y5S2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CDC42BPBQ9Y5S2 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
CDC42BPBQ9Y5S2 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC29.16■■■□□ 2.26
CDC42BPBQ9Y5S2 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CDC42BPBQ9Y5S2 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
CDC42BPBQ9Y5S2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
CDC42BPBQ9Y5S2 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC29.15■■■□□ 2.26
CDC42BPBQ9Y5S2 GOLGA6L5P-202ENST00000515341 1828 ntBASIC29.15■■■□□ 2.26
CDC42BPBQ9Y5S2 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
CDC42BPBQ9Y5S2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC29.14■■■□□ 2.26
CDC42BPBQ9Y5S2 PPIH-202ENST00000372549 327 ntTSL 3 BASIC29.14■■■□□ 2.26
CDC42BPBQ9Y5S2 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
CDC42BPBQ9Y5S2 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC29.14■■■□□ 2.26
CDC42BPBQ9Y5S2 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC29.14■■■□□ 2.26
CDC42BPBQ9Y5S2 AC016734.2-201ENST00000624325 1377 ntBASIC29.14■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms