Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.48■□□□□ 0.87
CHD7Q9P2D1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.48■□□□□ 0.87
CHD7Q9P2D1 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.48■□□□□ 0.87
CHD7Q9P2D1 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHD7Q9P2D1 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.48■□□□□ 0.87
CHD7Q9P2D1 TSPY19P-201ENST00000418461 509 ntBASIC20.48■□□□□ 0.87
CHD7Q9P2D1 TSPY18P-201ENST00000441642 509 ntBASIC20.48■□□□□ 0.87
CHD7Q9P2D1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.48■□□□□ 0.87
CHD7Q9P2D1 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CHD7Q9P2D1 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.48■□□□□ 0.87
CHD7Q9P2D1 AL160286.2-201ENST00000567150 934 ntBASIC20.48■□□□□ 0.87
CHD7Q9P2D1 AC120114.3-201ENST00000611923 658 ntBASIC20.48■□□□□ 0.87
CHD7Q9P2D1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.48■□□□□ 0.87
CHD7Q9P2D1 AC036111.1-201ENST00000533973 1582 ntBASIC20.48■□□□□ 0.87
CHD7Q9P2D1 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CHD7Q9P2D1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHD7Q9P2D1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CHD7Q9P2D1 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHD7Q9P2D1 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CHD7Q9P2D1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHD7Q9P2D1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHD7Q9P2D1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
CHD7Q9P2D1 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHD7Q9P2D1 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CHD7Q9P2D1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CHD7Q9P2D1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CHD7Q9P2D1 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHD7Q9P2D1 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.47■□□□□ 0.87
CHD7Q9P2D1 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.47■□□□□ 0.87
CHD7Q9P2D1 KRT16P4-201ENST00000453883 522 ntBASIC20.47■□□□□ 0.87
CHD7Q9P2D1 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.47■□□□□ 0.87
CHD7Q9P2D1 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.47■□□□□ 0.87
CHD7Q9P2D1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.47■□□□□ 0.87
CHD7Q9P2D1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CHD7Q9P2D1 AC006128.1-201ENST00000624704 1661 ntBASIC20.47■□□□□ 0.87
CHD7Q9P2D1 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.47■□□□□ 0.87
CHD7Q9P2D1 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.47■□□□□ 0.87
CHD7Q9P2D1 KRT16P6-202ENST00000425692 1426 ntBASIC20.47■□□□□ 0.87
CHD7Q9P2D1 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.47■□□□□ 0.87
CHD7Q9P2D1 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
CHD7Q9P2D1 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CHD7Q9P2D1 BX276092.5-203ENST00000456199 560 ntBASIC20.46■□□□□ 0.87
CHD7Q9P2D1 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHD7Q9P2D1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHD7Q9P2D1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.46■□□□□ 0.87
CHD7Q9P2D1 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
CHD7Q9P2D1 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHD7Q9P2D1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHD7Q9P2D1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHD7Q9P2D1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHD7Q9P2D1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CHD7Q9P2D1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.46■□□□□ 0.87
CHD7Q9P2D1 MRPL3P1-201ENST00000400109 1033 ntBASIC20.46■□□□□ 0.87
CHD7Q9P2D1 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.46■□□□□ 0.87
CHD7Q9P2D1 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHD7Q9P2D1 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHD7Q9P2D1 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHD7Q9P2D1 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHD7Q9P2D1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHD7Q9P2D1 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.45■□□□□ 0.86
CHD7Q9P2D1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHD7Q9P2D1 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHD7Q9P2D1 TSSC2-201ENST00000450217 709 ntBASIC20.45■□□□□ 0.86
CHD7Q9P2D1 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.45■□□□□ 0.86
CHD7Q9P2D1 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CHD7Q9P2D1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.45■□□□□ 0.86
CHD7Q9P2D1 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.45■□□□□ 0.86
CHD7Q9P2D1 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHD7Q9P2D1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHD7Q9P2D1 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHD7Q9P2D1 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHD7Q9P2D1 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
CHD7Q9P2D1 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHD7Q9P2D1 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.44■□□□□ 0.86
CHD7Q9P2D1 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.44■□□□□ 0.86
CHD7Q9P2D1 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHD7Q9P2D1 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.44■□□□□ 0.86
CHD7Q9P2D1 AC092183.1-201ENST00000469884 875 ntBASIC20.44■□□□□ 0.86
CHD7Q9P2D1 AC034232.1-201ENST00000506026 1064 ntBASIC20.44■□□□□ 0.86
CHD7Q9P2D1 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.44■□□□□ 0.86
CHD7Q9P2D1 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.44■□□□□ 0.86
CHD7Q9P2D1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CHD7Q9P2D1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHD7Q9P2D1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.44■□□□□ 0.86
CHD7Q9P2D1 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.44■□□□□ 0.86
CHD7Q9P2D1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHD7Q9P2D1 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
CHD7Q9P2D1 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.44■□□□□ 0.86
CHD7Q9P2D1 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CHD7Q9P2D1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.44■□□□□ 0.86
CHD7Q9P2D1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHD7Q9P2D1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CHD7Q9P2D1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHD7Q9P2D1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
CHD7Q9P2D1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.43■□□□□ 0.86
CHD7Q9P2D1 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHD7Q9P2D1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.43■□□□□ 0.86
CHD7Q9P2D1 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
CHD7Q9P2D1 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.43■□□□□ 0.86
CHD7Q9P2D1 CHCHD2P8-201ENST00000429873 447 ntBASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms