Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.39■□□□□ 0.37
HINT3Q9NQE9 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HINT3Q9NQE9 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.39■□□□□ 0.37
HINT3Q9NQE9 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
HINT3Q9NQE9 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HINT3Q9NQE9 MYC-209ENST00000641252 345 ntBASIC17.39■□□□□ 0.37
HINT3Q9NQE9 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HINT3Q9NQE9 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HINT3Q9NQE9 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HINT3Q9NQE9 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HINT3Q9NQE9 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HINT3Q9NQE9 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
HINT3Q9NQE9 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.38■□□□□ 0.37
HINT3Q9NQE9 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.38■□□□□ 0.37
HINT3Q9NQE9 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HINT3Q9NQE9 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HINT3Q9NQE9 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HINT3Q9NQE9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HINT3Q9NQE9 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.38■□□□□ 0.37
HINT3Q9NQE9 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HINT3Q9NQE9 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HINT3Q9NQE9 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
HINT3Q9NQE9 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HINT3Q9NQE9 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HINT3Q9NQE9 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.38■□□□□ 0.37
HINT3Q9NQE9 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.38■□□□□ 0.37
HINT3Q9NQE9 AC083880.1-201ENST00000608266 535 ntBASIC17.38■□□□□ 0.37
HINT3Q9NQE9 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HINT3Q9NQE9 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.38■□□□□ 0.37
HINT3Q9NQE9 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HINT3Q9NQE9 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HINT3Q9NQE9 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
HINT3Q9NQE9 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HINT3Q9NQE9 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HINT3Q9NQE9 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HINT3Q9NQE9 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HINT3Q9NQE9 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HINT3Q9NQE9 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HINT3Q9NQE9 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HINT3Q9NQE9 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 AC020763.4-201ENST00000623414 4170 ntBASIC17.37■□□□□ 0.37
HINT3Q9NQE9 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 SDHAP1-207ENST00000440850 2000 ntBASIC17.37■□□□□ 0.37
HINT3Q9NQE9 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 FP475955.4-201ENST00000623131 1990 ntBASIC17.37■□□□□ 0.37
HINT3Q9NQE9 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.37■□□□□ 0.37
HINT3Q9NQE9 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.36■□□□□ 0.37
HINT3Q9NQE9 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
HINT3Q9NQE9 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HINT3Q9NQE9 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HINT3Q9NQE9 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HINT3Q9NQE9 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
HINT3Q9NQE9 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HINT3Q9NQE9 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HINT3Q9NQE9 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HINT3Q9NQE9 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
HINT3Q9NQE9 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HINT3Q9NQE9 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.36■□□□□ 0.37
HINT3Q9NQE9 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HINT3Q9NQE9 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.36■□□□□ 0.37
HINT3Q9NQE9 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.36■□□□□ 0.37
HINT3Q9NQE9 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.36■□□□□ 0.37
HINT3Q9NQE9 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.36■□□□□ 0.37
HINT3Q9NQE9 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
HINT3Q9NQE9 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HINT3Q9NQE9 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms