Protein–RNA interactions for Protein: Q9BYQ3

KRTAP9-3, Keratin-associated protein 9-3, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP9-3Q9BYQ3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 KRT8P11-201ENST00000409686 1436 ntBASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 KRT8P10-201ENST00000450021 1447 ntBASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 YY1P1-201ENST00000427625 668 ntBASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 VN1R53P-201ENST00000429536 957 ntBASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 AP002383.4-201ENST00000442518 975 ntBASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 AC092597.1-201ENST00000487352 616 ntBASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 AC016734.2-201ENST00000624325 1377 ntBASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC8.82□□□□□ -1
KRTAP9-3Q9BYQ3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 AC092720.2-201ENST00000602388 1665 ntBASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 AC006128.1-201ENST00000624704 1661 ntBASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 AC004870.1-201ENST00000315132 882 ntBASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 AL645929.1-201ENST00000420084 975 ntBASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 FAAHP1-202ENST00000446499 1238 ntBASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 NOVA1-209ENST00000547619 947 ntTSL 3 BASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 PRELID1P1-202ENST00000567272 903 ntBASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 AC111152.3-201ENST00000569699 673 ntBASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
KRTAP9-3Q9BYQ3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC8.81□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms