Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CSMD1Q96PZ7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.43■□□□□ 0.22
CSMD1Q96PZ7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CSMD1Q96PZ7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.43■□□□□ 0.22
CSMD1Q96PZ7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CSMD1Q96PZ7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.43■□□□□ 0.22
CSMD1Q96PZ7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC16.43■□□□□ 0.22
CSMD1Q96PZ7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSMD1Q96PZ7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSMD1Q96PZ7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CSMD1Q96PZ7 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.43■□□□□ 0.22
CSMD1Q96PZ7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSMD1Q96PZ7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.42■□□□□ 0.22
CSMD1Q96PZ7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSMD1Q96PZ7 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.42■□□□□ 0.22
CSMD1Q96PZ7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.42■□□□□ 0.22
CSMD1Q96PZ7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSMD1Q96PZ7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSMD1Q96PZ7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.42■□□□□ 0.22
CSMD1Q96PZ7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CSMD1Q96PZ7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSMD1Q96PZ7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC16.42■□□□□ 0.22
CSMD1Q96PZ7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSMD1Q96PZ7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CSMD1Q96PZ7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.42■□□□□ 0.22
CSMD1Q96PZ7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSMD1Q96PZ7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CSMD1Q96PZ7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CSMD1Q96PZ7 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.42■□□□□ 0.22
CSMD1Q96PZ7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.42■□□□□ 0.22
CSMD1Q96PZ7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSMD1Q96PZ7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSMD1Q96PZ7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CSMD1Q96PZ7 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.42■□□□□ 0.22
CSMD1Q96PZ7 AL035633.1-201ENST00000406139 838 ntBASIC16.42■□□□□ 0.22
CSMD1Q96PZ7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.42■□□□□ 0.22
CSMD1Q96PZ7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSMD1Q96PZ7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSMD1Q96PZ7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.41■□□□□ 0.22
CSMD1Q96PZ7 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.41■□□□□ 0.22
CSMD1Q96PZ7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.41■□□□□ 0.22
CSMD1Q96PZ7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.41■□□□□ 0.22
CSMD1Q96PZ7 ECEL1P1-201ENST00000373592 1742 ntBASIC16.41■□□□□ 0.22
CSMD1Q96PZ7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSMD1Q96PZ7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CSMD1Q96PZ7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSMD1Q96PZ7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSMD1Q96PZ7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CSMD1Q96PZ7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.41■□□□□ 0.22
CSMD1Q96PZ7 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSMD1Q96PZ7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.41■□□□□ 0.22
CSMD1Q96PZ7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CSMD1Q96PZ7 MIR564-202ENST00000385049 94 ntBASIC16.41■□□□□ 0.22
CSMD1Q96PZ7 FOSL1P1-201ENST00000511041 816 ntBASIC16.41■□□□□ 0.22
CSMD1Q96PZ7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CSMD1Q96PZ7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CSMD1Q96PZ7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.4■□□□□ 0.22
CSMD1Q96PZ7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.4■□□□□ 0.22
CSMD1Q96PZ7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSMD1Q96PZ7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSMD1Q96PZ7 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.4■□□□□ 0.22
CSMD1Q96PZ7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CSMD1Q96PZ7 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSMD1Q96PZ7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.4■□□□□ 0.22
CSMD1Q96PZ7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CSMD1Q96PZ7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSMD1Q96PZ7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSMD1Q96PZ7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.4■□□□□ 0.22
CSMD1Q96PZ7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.4■□□□□ 0.22
CSMD1Q96PZ7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CSMD1Q96PZ7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSMD1Q96PZ7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSMD1Q96PZ7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CSMD1Q96PZ7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSMD1Q96PZ7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
CSMD1Q96PZ7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.4■□□□□ 0.22
CSMD1Q96PZ7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.4■□□□□ 0.22
CSMD1Q96PZ7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CSMD1Q96PZ7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
CSMD1Q96PZ7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CSMD1Q96PZ7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CSMD1Q96PZ7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSMD1Q96PZ7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.4■□□□□ 0.22
CSMD1Q96PZ7 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CSMD1Q96PZ7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSMD1Q96PZ7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.4■□□□□ 0.22
CSMD1Q96PZ7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSMD1Q96PZ7 LINC00167-201ENST00000530583 1419 ntBASIC16.4■□□□□ 0.22
CSMD1Q96PZ7 PLK5-205ENST00000642079 1969 ntBASIC16.4■□□□□ 0.22
CSMD1Q96PZ7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CSMD1Q96PZ7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
CSMD1Q96PZ7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.39■□□□□ 0.22
CSMD1Q96PZ7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.39■□□□□ 0.22
CSMD1Q96PZ7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSMD1Q96PZ7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.39■□□□□ 0.21
CSMD1Q96PZ7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.39■□□□□ 0.21
CSMD1Q96PZ7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CSMD1Q96PZ7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.39■□□□□ 0.21
CSMD1Q96PZ7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.39■□□□□ 0.21
CSMD1Q96PZ7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms