Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SNED1Q8TER0 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SNED1Q8TER0 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SNED1Q8TER0 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
SNED1Q8TER0 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC23.49■■□□□ 1.35
SNED1Q8TER0 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SNED1Q8TER0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.49■■□□□ 1.35
SNED1Q8TER0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SNED1Q8TER0 RASA4DP-201ENST00000460726 1199 ntBASIC23.49■■□□□ 1.35
SNED1Q8TER0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
SNED1Q8TER0 UNC93B7-201ENST00000509439 705 ntBASIC23.49■■□□□ 1.35
SNED1Q8TER0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC23.49■■□□□ 1.35
SNED1Q8TER0 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SNED1Q8TER0 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC23.49■■□□□ 1.35
SNED1Q8TER0 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
SNED1Q8TER0 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC23.49■■□□□ 1.35
SNED1Q8TER0 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC23.48■■□□□ 1.35
SNED1Q8TER0 AC073314.1-201ENST00000568729 2216 ntBASIC23.48■■□□□ 1.35
SNED1Q8TER0 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SNED1Q8TER0 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
SNED1Q8TER0 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SNED1Q8TER0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
SNED1Q8TER0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SNED1Q8TER0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC23.48■■□□□ 1.35
SNED1Q8TER0 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SNED1Q8TER0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.48■■□□□ 1.35
SNED1Q8TER0 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SNED1Q8TER0 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SNED1Q8TER0 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SNED1Q8TER0 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
SNED1Q8TER0 KRT17P6-201ENST00000453795 1220 ntBASIC23.48■■□□□ 1.35
SNED1Q8TER0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC23.48■■□□□ 1.35
SNED1Q8TER0 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC23.48■■□□□ 1.35
SNED1Q8TER0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
SNED1Q8TER0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
SNED1Q8TER0 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
SNED1Q8TER0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC23.47■■□□□ 1.35
SNED1Q8TER0 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SNED1Q8TER0 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
SNED1Q8TER0 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC23.47■■□□□ 1.35
SNED1Q8TER0 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC23.47■■□□□ 1.35
SNED1Q8TER0 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SNED1Q8TER0 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SNED1Q8TER0 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC23.47■■□□□ 1.35
SNED1Q8TER0 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC23.47■■□□□ 1.35
SNED1Q8TER0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC23.47■■□□□ 1.35
SNED1Q8TER0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
SNED1Q8TER0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
SNED1Q8TER0 AC016734.2-201ENST00000624325 1377 ntBASIC23.46■■□□□ 1.35
SNED1Q8TER0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC23.46■■□□□ 1.35
SNED1Q8TER0 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
SNED1Q8TER0 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC23.46■■□□□ 1.35
SNED1Q8TER0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
SNED1Q8TER0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
SNED1Q8TER0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SNED1Q8TER0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
SNED1Q8TER0 BUB3-202ENST00000368859 667 ntTSL 3 BASIC23.46■■□□□ 1.35
SNED1Q8TER0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC23.46■■□□□ 1.35
SNED1Q8TER0 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
SNED1Q8TER0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC23.46■■□□□ 1.35
SNED1Q8TER0 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
SNED1Q8TER0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SNED1Q8TER0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
SNED1Q8TER0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
SNED1Q8TER0 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
SNED1Q8TER0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC23.45■■□□□ 1.34
SNED1Q8TER0 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
SNED1Q8TER0 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
SNED1Q8TER0 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
SNED1Q8TER0 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC23.45■■□□□ 1.34
SNED1Q8TER0 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC23.45■■□□□ 1.34
SNED1Q8TER0 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
SNED1Q8TER0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC23.45■■□□□ 1.34
SNED1Q8TER0 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
SNED1Q8TER0 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
SNED1Q8TER0 AP005212.1-201ENST00000581547 1997 ntBASIC23.45■■□□□ 1.34
SNED1Q8TER0 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
SNED1Q8TER0 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
SNED1Q8TER0 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC23.44■■□□□ 1.34
SNED1Q8TER0 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC23.44■■□□□ 1.34
SNED1Q8TER0 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC23.44■■□□□ 1.34
SNED1Q8TER0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
SNED1Q8TER0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
SNED1Q8TER0 GOLGA2P11-201ENST00000562660 1621 ntBASIC23.44■■□□□ 1.34
SNED1Q8TER0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
SNED1Q8TER0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC23.44■■□□□ 1.34
SNED1Q8TER0 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC23.44■■□□□ 1.34
SNED1Q8TER0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC23.44■■□□□ 1.34
SNED1Q8TER0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC23.44■■□□□ 1.34
SNED1Q8TER0 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
SNED1Q8TER0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC23.43■■□□□ 1.34
SNED1Q8TER0 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SNED1Q8TER0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
SNED1Q8TER0 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC23.43■■□□□ 1.34
SNED1Q8TER0 PRELID1P1-202ENST00000567272 903 ntBASIC23.43■■□□□ 1.34
SNED1Q8TER0 AC111152.3-201ENST00000569699 673 ntBASIC23.43■■□□□ 1.34
SNED1Q8TER0 MIR3652-201ENST00000579335 131 ntBASIC23.43■■□□□ 1.34
SNED1Q8TER0 KRT8P10-201ENST00000450021 1447 ntBASIC23.43■■□□□ 1.34
SNED1Q8TER0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
SNED1Q8TER0 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms