Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.07■□□□□ 0.32
ZIC4Q8N9L1 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZIC4Q8N9L1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
ZIC4Q8N9L1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZIC4Q8N9L1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZIC4Q8N9L1 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZIC4Q8N9L1 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZIC4Q8N9L1 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZIC4Q8N9L1 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.06■□□□□ 0.32
ZIC4Q8N9L1 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZIC4Q8N9L1 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.06■□□□□ 0.32
ZIC4Q8N9L1 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.06■□□□□ 0.32
ZIC4Q8N9L1 SNORA78-201ENST00000459373 127 ntBASIC17.06■□□□□ 0.32
ZIC4Q8N9L1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.06■□□□□ 0.32
ZIC4Q8N9L1 B3GAT3P1-201ENST00000471720 806 ntBASIC17.06■□□□□ 0.32
ZIC4Q8N9L1 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.06■□□□□ 0.32
ZIC4Q8N9L1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
ZIC4Q8N9L1 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
ZIC4Q8N9L1 AC026471.5-201ENST00000615068 467 ntBASIC17.06■□□□□ 0.32
ZIC4Q8N9L1 MIR6786-201ENST00000616843 113 ntBASIC17.06■□□□□ 0.32
ZIC4Q8N9L1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZIC4Q8N9L1 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZIC4Q8N9L1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZIC4Q8N9L1 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZIC4Q8N9L1 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZIC4Q8N9L1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.06■□□□□ 0.32
ZIC4Q8N9L1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
ZIC4Q8N9L1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
ZIC4Q8N9L1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.06■□□□□ 0.32
ZIC4Q8N9L1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZIC4Q8N9L1 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZIC4Q8N9L1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
ZIC4Q8N9L1 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZIC4Q8N9L1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZIC4Q8N9L1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZIC4Q8N9L1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
ZIC4Q8N9L1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ZIC4Q8N9L1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZIC4Q8N9L1 AC004951.3-201ENST00000418645 1148 ntBASIC17.05■□□□□ 0.32
ZIC4Q8N9L1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.05■□□□□ 0.32
ZIC4Q8N9L1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.05■□□□□ 0.32
ZIC4Q8N9L1 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.05■□□□□ 0.32
ZIC4Q8N9L1 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.05■□□□□ 0.32
ZIC4Q8N9L1 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.05■□□□□ 0.32
ZIC4Q8N9L1 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZIC4Q8N9L1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.05■□□□□ 0.32
ZIC4Q8N9L1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZIC4Q8N9L1 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZIC4Q8N9L1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZIC4Q8N9L1 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZIC4Q8N9L1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
ZIC4Q8N9L1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.05■□□□□ 0.32
ZIC4Q8N9L1 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZIC4Q8N9L1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZIC4Q8N9L1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.05■□□□□ 0.32
ZIC4Q8N9L1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZIC4Q8N9L1 AC141586.3-201ENST00000562166 1838 ntBASIC17.05■□□□□ 0.32
ZIC4Q8N9L1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZIC4Q8N9L1 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZIC4Q8N9L1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.05■□□□□ 0.32
ZIC4Q8N9L1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.04■□□□□ 0.32
ZIC4Q8N9L1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZIC4Q8N9L1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZIC4Q8N9L1 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.04■□□□□ 0.32
ZIC4Q8N9L1 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
ZIC4Q8N9L1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.04■□□□□ 0.32
ZIC4Q8N9L1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.04■□□□□ 0.32
ZIC4Q8N9L1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZIC4Q8N9L1 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
ZIC4Q8N9L1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
ZIC4Q8N9L1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.04■□□□□ 0.32
ZIC4Q8N9L1 AL596275.1-201ENST00000423464 877 ntBASIC17.04■□□□□ 0.32
ZIC4Q8N9L1 AL355355.2-201ENST00000442321 338 ntBASIC17.04■□□□□ 0.32
ZIC4Q8N9L1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.04■□□□□ 0.32
ZIC4Q8N9L1 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.04■□□□□ 0.32
ZIC4Q8N9L1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.04■□□□□ 0.32
ZIC4Q8N9L1 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.04■□□□□ 0.32
ZIC4Q8N9L1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
ZIC4Q8N9L1 MIR4497-201ENST00000583208 89 ntBASIC17.04■□□□□ 0.32
ZIC4Q8N9L1 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.04■□□□□ 0.32
ZIC4Q8N9L1 REXO1L10P-201ENST00000615707 1290 ntBASIC17.04■□□□□ 0.32
ZIC4Q8N9L1 AC011298.2-201ENST00000617989 482 ntBASIC17.04■□□□□ 0.32
ZIC4Q8N9L1 REXO1L12P-201ENST00000622156 912 ntBASIC17.04■□□□□ 0.32
ZIC4Q8N9L1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ZIC4Q8N9L1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZIC4Q8N9L1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.04■□□□□ 0.32
ZIC4Q8N9L1 FSCN1P1-201ENST00000568912 1481 ntBASIC17.04■□□□□ 0.32
ZIC4Q8N9L1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZIC4Q8N9L1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZIC4Q8N9L1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZIC4Q8N9L1 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZIC4Q8N9L1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZIC4Q8N9L1 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.03■□□□□ 0.32
ZIC4Q8N9L1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.03■□□□□ 0.32
ZIC4Q8N9L1 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZIC4Q8N9L1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.03■□□□□ 0.32
ZIC4Q8N9L1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZIC4Q8N9L1 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.03■□□□□ 0.32
ZIC4Q8N9L1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZIC4Q8N9L1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms