Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 AC018712.1-201ENST00000455767 687 ntBASIC21.86■■□□□ 1.09
LBX1P52954 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
LBX1P52954 NMU-202ENST00000505262 693 ntTSL 3 BASIC21.86■■□□□ 1.09
LBX1P52954 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC21.86■■□□□ 1.09
LBX1P52954 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC21.86■■□□□ 1.09
LBX1P52954 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC21.86■■□□□ 1.09
LBX1P52954 AC116407.3-201ENST00000623905 1129 ntBASIC21.86■■□□□ 1.09
LBX1P52954 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.86■■□□□ 1.09
LBX1P52954 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.86■■□□□ 1.09
LBX1P52954 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.85■■□□□ 1.09
LBX1P52954 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LBX1P52954 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LBX1P52954 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
LBX1P52954 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LBX1P52954 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LBX1P52954 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.85■■□□□ 1.09
LBX1P52954 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LBX1P52954 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC21.85■■□□□ 1.09
LBX1P52954 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LBX1P52954 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC21.85■■□□□ 1.09
LBX1P52954 RFPL4AP1-201ENST00000530883 850 ntBASIC21.85■■□□□ 1.09
LBX1P52954 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC21.85■■□□□ 1.09
LBX1P52954 IRF8-202ENST00000562492 946 ntTSL 3 BASIC21.85■■□□□ 1.09
LBX1P52954 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LBX1P52954 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LBX1P52954 FAM197Y3-203ENST00000618346 717 ntBASIC21.85■■□□□ 1.09
LBX1P52954 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.85■■□□□ 1.09
LBX1P52954 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LBX1P52954 NSUN5P1-202ENST00000421140 1535 ntBASIC21.85■■□□□ 1.09
LBX1P52954 NSUN5P2-203ENST00000457352 1529 ntBASIC21.85■■□□□ 1.09
LBX1P52954 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.85■■□□□ 1.09
LBX1P52954 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
LBX1P52954 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LBX1P52954 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LBX1P52954 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LBX1P52954 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LBX1P52954 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LBX1P52954 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LBX1P52954 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LBX1P52954 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC21.84■■□□□ 1.09
LBX1P52954 METTL21AP1-201ENST00000438852 635 ntBASIC21.84■■□□□ 1.09
LBX1P52954 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC21.84■■□□□ 1.09
LBX1P52954 DNAJB3-201ENST00000446806 729 ntBASIC21.84■■□□□ 1.09
LBX1P52954 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC21.84■■□□□ 1.09
LBX1P52954 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
LBX1P52954 FAM215A-202ENST00000632077 792 ntBASIC21.84■■□□□ 1.09
LBX1P52954 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21.84■■□□□ 1.09
LBX1P52954 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LBX1P52954 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LBX1P52954 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LBX1P52954 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LBX1P52954 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.83■■□□□ 1.09
LBX1P52954 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC21.83■■□□□ 1.09
LBX1P52954 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
LBX1P52954 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LBX1P52954 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
LBX1P52954 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
LBX1P52954 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.83■■□□□ 1.09
LBX1P52954 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.09
LBX1P52954 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LBX1P52954 AC104109.2-201ENST00000602919 1418 ntBASIC21.83■■□□□ 1.09
LBX1P52954 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC21.83■■□□□ 1.09
LBX1P52954 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LBX1P52954 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LBX1P52954 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LBX1P52954 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.83■■□□□ 1.09
LBX1P52954 COX20P2-201ENST00000452636 358 ntBASIC21.83■■□□□ 1.09
LBX1P52954 LHX6-205ENST00000464484 666 ntTSL 2 BASIC21.83■■□□□ 1.09
LBX1P52954 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC21.83■■□□□ 1.09
LBX1P52954 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC21.83■■□□□ 1.09
LBX1P52954 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC21.83■■□□□ 1.09
LBX1P52954 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC21.83■■□□□ 1.09
LBX1P52954 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC21.83■■□□□ 1.09
LBX1P52954 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
LBX1P52954 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
LBX1P52954 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
LBX1P52954 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
LBX1P52954 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LBX1P52954 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LBX1P52954 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.82■■□□□ 1.08
LBX1P52954 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.82■■□□□ 1.08
LBX1P52954 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC21.82■■□□□ 1.08
LBX1P52954 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LBX1P52954 IMP4-203ENST00000409935 958 ntTSL 5 BASIC21.82■■□□□ 1.08
LBX1P52954 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC21.82■■□□□ 1.08
LBX1P52954 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LBX1P52954 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC21.82■■□□□ 1.08
LBX1P52954 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.82■■□□□ 1.08
LBX1P52954 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LBX1P52954 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
LBX1P52954 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
LBX1P52954 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LBX1P52954 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
LBX1P52954 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.81■■□□□ 1.08
LBX1P52954 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LBX1P52954 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
LBX1P52954 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
LBX1P52954 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
LBX1P52954 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LBX1P52954 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms