Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
ABCD3P28288 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ABCD3P28288 AC093484.2-201ENST00000580996 2166 ntBASIC17.77■□□□□ 0.43
ABCD3P28288 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ABCD3P28288 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ABCD3P28288 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
ABCD3P28288 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
ABCD3P28288 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.77■□□□□ 0.43
ABCD3P28288 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.77■□□□□ 0.43
ABCD3P28288 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
ABCD3P28288 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ABCD3P28288 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ABCD3P28288 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
ABCD3P28288 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ABCD3P28288 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
ABCD3P28288 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ABCD3P28288 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ABCD3P28288 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.76■□□□□ 0.43
ABCD3P28288 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ABCD3P28288 RCC2P6-201ENST00000526625 1557 ntBASIC17.76■□□□□ 0.43
ABCD3P28288 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ABCD3P28288 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ABCD3P28288 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ABCD3P28288 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ABCD3P28288 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ABCD3P28288 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.76■□□□□ 0.43
ABCD3P28288 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ABCD3P28288 AC116562.2-201ENST00000507042 360 ntBASIC17.76■□□□□ 0.43
ABCD3P28288 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.76■□□□□ 0.43
ABCD3P28288 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.76■□□□□ 0.43
ABCD3P28288 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.76■□□□□ 0.43
ABCD3P28288 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ABCD3P28288 REXO1L10P-201ENST00000615707 1290 ntBASIC17.76■□□□□ 0.43
ABCD3P28288 MIR6786-201ENST00000616843 113 ntBASIC17.76■□□□□ 0.43
ABCD3P28288 REXO1L12P-201ENST00000622156 912 ntBASIC17.76■□□□□ 0.43
ABCD3P28288 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ABCD3P28288 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.76■□□□□ 0.43
ABCD3P28288 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.76■□□□□ 0.43
ABCD3P28288 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
ABCD3P28288 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.76■□□□□ 0.43
ABCD3P28288 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ABCD3P28288 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
ABCD3P28288 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.75■□□□□ 0.43
ABCD3P28288 FSCN1P1-201ENST00000568912 1481 ntBASIC17.75■□□□□ 0.43
ABCD3P28288 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ABCD3P28288 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
ABCD3P28288 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.75■□□□□ 0.43
ABCD3P28288 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
ABCD3P28288 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.75■□□□□ 0.43
ABCD3P28288 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.75■□□□□ 0.43
ABCD3P28288 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.75■□□□□ 0.43
ABCD3P28288 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ABCD3P28288 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
ABCD3P28288 B3GAT3P1-201ENST00000471720 806 ntBASIC17.75■□□□□ 0.43
ABCD3P28288 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.75■□□□□ 0.43
ABCD3P28288 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.75■□□□□ 0.43
ABCD3P28288 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.75■□□□□ 0.43
ABCD3P28288 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ABCD3P28288 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ABCD3P28288 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ABCD3P28288 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ABCD3P28288 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ABCD3P28288 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ABCD3P28288 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ABCD3P28288 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
ABCD3P28288 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ABCD3P28288 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ABCD3P28288 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ABCD3P28288 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ABCD3P28288 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ABCD3P28288 KRT8P41-201ENST00000533985 1514 ntBASIC17.74■□□□□ 0.43
ABCD3P28288 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
ABCD3P28288 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ABCD3P28288 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ABCD3P28288 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ABCD3P28288 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.74■□□□□ 0.43
ABCD3P28288 MESTP1-201ENST00000404287 994 ntBASIC17.74■□□□□ 0.43
ABCD3P28288 AC004951.3-201ENST00000418645 1148 ntBASIC17.74■□□□□ 0.43
ABCD3P28288 AC011506.1-201ENST00000474329 610 ntBASIC17.74■□□□□ 0.43
ABCD3P28288 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.74■□□□□ 0.43
ABCD3P28288 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.74■□□□□ 0.43
ABCD3P28288 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.74■□□□□ 0.43
ABCD3P28288 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
ABCD3P28288 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ABCD3P28288 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ABCD3P28288 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.74■□□□□ 0.43
ABCD3P28288 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ABCD3P28288 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ABCD3P28288 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ABCD3P28288 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
ABCD3P28288 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ABCD3P28288 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
ABCD3P28288 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ABCD3P28288 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ABCD3P28288 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.73■□□□□ 0.43
ABCD3P28288 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.73■□□□□ 0.43
ABCD3P28288 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ABCD3P28288 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
ABCD3P28288 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ABCD3P28288 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms