Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 C1QBPP2-201ENST00000528754 825 ntBASIC19.66■□□□□ 0.74
PTPN3P26045 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.66■□□□□ 0.74
PTPN3P26045 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.66■□□□□ 0.74
PTPN3P26045 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN3P26045 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN3P26045 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN3P26045 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PTPN3P26045 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN3P26045 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN3P26045 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN3P26045 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PTPN3P26045 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.65■□□□□ 0.74
PTPN3P26045 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PTPN3P26045 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN3P26045 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PTPN3P26045 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.65■□□□□ 0.74
PTPN3P26045 FAM201B-201ENST00000458407 597 ntBASIC19.65■□□□□ 0.74
PTPN3P26045 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
PTPN3P26045 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN3P26045 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN3P26045 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.65■□□□□ 0.74
PTPN3P26045 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.65■□□□□ 0.74
PTPN3P26045 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.65■□□□□ 0.74
PTPN3P26045 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.65■□□□□ 0.74
PTPN3P26045 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.65■□□□□ 0.74
PTPN3P26045 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PTPN3P26045 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN3P26045 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.65■□□□□ 0.74
PTPN3P26045 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN3P26045 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN3P26045 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN3P26045 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN3P26045 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTPN3P26045 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
PTPN3P26045 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
PTPN3P26045 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.74
PTPN3P26045 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PTPN3P26045 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PTPN3P26045 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTPN3P26045 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
PTPN3P26045 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.64■□□□□ 0.73
PTPN3P26045 AL160286.2-201ENST00000567150 934 ntBASIC19.64■□□□□ 0.73
PTPN3P26045 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.64■□□□□ 0.73
PTPN3P26045 ITM2C-210ENST00000620962 501 ntBASIC19.64■□□□□ 0.73
PTPN3P26045 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTPN3P26045 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PTPN3P26045 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTPN3P26045 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
PTPN3P26045 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTPN3P26045 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.64■□□□□ 0.73
PTPN3P26045 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
PTPN3P26045 AL049812.1-201ENST00000432563 2267 ntBASIC19.64■□□□□ 0.73
PTPN3P26045 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PTPN3P26045 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN3P26045 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PTPN3P26045 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN3P26045 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN3P26045 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.63■□□□□ 0.73
PTPN3P26045 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
PTPN3P26045 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN3P26045 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN3P26045 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN3P26045 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN3P26045 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.63■□□□□ 0.73
PTPN3P26045 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN3P26045 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN3P26045 RPPH1-201ENST00000516869 333 ntBASIC19.63■□□□□ 0.73
PTPN3P26045 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.63■□□□□ 0.73
PTPN3P26045 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
PTPN3P26045 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.63■□□□□ 0.73
PTPN3P26045 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.63■□□□□ 0.73
PTPN3P26045 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.63■□□□□ 0.73
PTPN3P26045 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN3P26045 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTPN3P26045 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.63■□□□□ 0.73
PTPN3P26045 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.63■□□□□ 0.73
PTPN3P26045 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.63■□□□□ 0.73
PTPN3P26045 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.62■□□□□ 0.73
PTPN3P26045 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.62■□□□□ 0.73
PTPN3P26045 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN3P26045 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PTPN3P26045 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN3P26045 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN3P26045 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.62■□□□□ 0.73
PTPN3P26045 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN3P26045 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.62■□□□□ 0.73
PTPN3P26045 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN3P26045 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PTPN3P26045 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.62■□□□□ 0.73
PTPN3P26045 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.62■□□□□ 0.73
PTPN3P26045 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.62■□□□□ 0.73
PTPN3P26045 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.62■□□□□ 0.73
PTPN3P26045 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.62■□□□□ 0.73
PTPN3P26045 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.62■□□□□ 0.73
PTPN3P26045 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN3P26045 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN3P26045 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.62■□□□□ 0.73
PTPN3P26045 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN3P26045 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTPN3P26045 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms