Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
COL5A2P05997 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC25.43■■□□□ 1.66
COL5A2P05997 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC25.43■■□□□ 1.66
COL5A2P05997 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC25.43■■□□□ 1.66
COL5A2P05997 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC25.43■■□□□ 1.66
COL5A2P05997 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC25.43■■□□□ 1.66
COL5A2P05997 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC25.43■■□□□ 1.66
COL5A2P05997 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC25.43■■□□□ 1.66
COL5A2P05997 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
COL5A2P05997 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC25.43■■□□□ 1.66
COL5A2P05997 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC25.43■■□□□ 1.66
COL5A2P05997 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
COL5A2P05997 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
COL5A2P05997 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
COL5A2P05997 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
COL5A2P05997 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC25.43■■□□□ 1.66
COL5A2P05997 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
COL5A2P05997 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC25.43■■□□□ 1.66
COL5A2P05997 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
COL5A2P05997 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC25.42■■□□□ 1.66
COL5A2P05997 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC25.42■■□□□ 1.66
COL5A2P05997 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC25.42■■□□□ 1.66
COL5A2P05997 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC25.42■■□□□ 1.66
COL5A2P05997 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
COL5A2P05997 AL162741.1-201ENST00000565563 1558 ntBASIC25.42■■□□□ 1.66
COL5A2P05997 TBCB-205ENST00000585746 875 ntTSL 3 BASIC25.42■■□□□ 1.66
COL5A2P05997 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
COL5A2P05997 AL732292.2-201ENST00000609649 430 ntBASIC25.42■■□□□ 1.66
COL5A2P05997 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC25.42■■□□□ 1.66
COL5A2P05997 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC25.42■■□□□ 1.66
COL5A2P05997 ME2-216ENST00000639850 2331 ntTSL 5 BASIC25.42■■□□□ 1.66
COL5A2P05997 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC25.42■■□□□ 1.66
COL5A2P05997 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
COL5A2P05997 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
COL5A2P05997 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
COL5A2P05997 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC25.42■■□□□ 1.66
COL5A2P05997 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
COL5A2P05997 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC25.42■■□□□ 1.66
COL5A2P05997 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC25.41■■□□□ 1.66
COL5A2P05997 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
COL5A2P05997 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
COL5A2P05997 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
COL5A2P05997 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC25.41■■□□□ 1.66
COL5A2P05997 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC25.41■■□□□ 1.66
COL5A2P05997 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC25.41■■□□□ 1.66
COL5A2P05997 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC25.41■■□□□ 1.66
COL5A2P05997 AC079602.3-201ENST00000623931 403 ntBASIC25.41■■□□□ 1.66
COL5A2P05997 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
COL5A2P05997 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
COL5A2P05997 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC25.41■■□□□ 1.66
COL5A2P05997 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
COL5A2P05997 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
COL5A2P05997 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC25.41■■□□□ 1.66
COL5A2P05997 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC25.41■■□□□ 1.66
COL5A2P05997 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC25.41■■□□□ 1.66
COL5A2P05997 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
COL5A2P05997 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
COL5A2P05997 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
COL5A2P05997 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
COL5A2P05997 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
COL5A2P05997 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC25.4■■□□□ 1.66
COL5A2P05997 AC004263.2-201ENST00000617183 678 ntBASIC25.4■■□□□ 1.66
COL5A2P05997 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
COL5A2P05997 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
COL5A2P05997 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
COL5A2P05997 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
COL5A2P05997 CHCHD2P8-201ENST00000429873 447 ntBASIC25.4■■□□□ 1.66
COL5A2P05997 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC25.4■■□□□ 1.66
COL5A2P05997 KRT8P26-201ENST00000534154 1276 ntBASIC25.4■■□□□ 1.66
COL5A2P05997 TPSP2-201ENST00000561760 610 ntBASIC25.4■■□□□ 1.66
COL5A2P05997 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
COL5A2P05997 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
COL5A2P05997 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
COL5A2P05997 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
COL5A2P05997 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.66
COL5A2P05997 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
COL5A2P05997 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.65
COL5A2P05997 AL691432.2-201ENST00000607222 2038 ntBASIC25.39■■□□□ 1.65
COL5A2P05997 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC25.39■■□□□ 1.65
COL5A2P05997 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
COL5A2P05997 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
COL5A2P05997 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC25.39■■□□□ 1.65
COL5A2P05997 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.65
COL5A2P05997 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC25.39■■□□□ 1.65
COL5A2P05997 HLA-F-220ENST00000434407 884 ntBASIC25.39■■□□□ 1.65
COL5A2P05997 NUS1P1-201ENST00000446295 882 ntBASIC25.39■■□□□ 1.65
COL5A2P05997 SEC1P-202ENST00000473944 940 ntBASIC25.39■■□□□ 1.65
COL5A2P05997 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
COL5A2P05997 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC25.39■■□□□ 1.65
COL5A2P05997 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC25.39■■□□□ 1.65
COL5A2P05997 AC104692.2-201ENST00000603054 253 ntBASIC25.39■■□□□ 1.65
COL5A2P05997 AC024243.1-201ENST00000609234 778 ntBASIC25.39■■□□□ 1.65
COL5A2P05997 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
COL5A2P05997 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.65
COL5A2P05997 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
COL5A2P05997 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
COL5A2P05997 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
COL5A2P05997 AP005212.1-201ENST00000581547 1997 ntBASIC25.38■■□□□ 1.65
COL5A2P05997 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
COL5A2P05997 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms