Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
APPP05067 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
APPP05067 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
APPP05067 ZNF815P-204ENST00000434898 1737 ntBASIC23.11■■□□□ 1.29
APPP05067 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
APPP05067 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
APPP05067 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
APPP05067 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC23.11■■□□□ 1.29
APPP05067 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC23.11■■□□□ 1.29
APPP05067 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
APPP05067 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC23.11■■□□□ 1.29
APPP05067 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC23.11■■□□□ 1.29
APPP05067 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC23.11■■□□□ 1.29
APPP05067 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC23.11■■□□□ 1.29
APPP05067 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC23.11■■□□□ 1.29
APPP05067 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC23.11■■□□□ 1.29
APPP05067 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC23.11■■□□□ 1.29
APPP05067 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
APPP05067 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC23.11■■□□□ 1.29
APPP05067 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
APPP05067 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
APPP05067 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC23.11■■□□□ 1.29
APPP05067 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
APPP05067 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC23.1■■□□□ 1.29
APPP05067 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
APPP05067 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
APPP05067 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC23.1■■□□□ 1.29
APPP05067 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
APPP05067 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
APPP05067 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC23.1■■□□□ 1.29
APPP05067 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
APPP05067 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC23.1■■□□□ 1.29
APPP05067 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC23.1■■□□□ 1.29
APPP05067 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC23.1■■□□□ 1.29
APPP05067 MIR6786-201ENST00000616843 113 ntBASIC23.1■■□□□ 1.29
APPP05067 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
APPP05067 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
APPP05067 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
APPP05067 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
APPP05067 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
APPP05067 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
APPP05067 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
APPP05067 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
APPP05067 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
APPP05067 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC23.09■■□□□ 1.29
APPP05067 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
APPP05067 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
APPP05067 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC23.09■■□□□ 1.29
APPP05067 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC23.09■■□□□ 1.29
APPP05067 AC011506.1-201ENST00000474329 610 ntBASIC23.09■■□□□ 1.29
APPP05067 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC23.09■■□□□ 1.29
APPP05067 AC026271.3-201ENST00000571884 352 ntBASIC23.09■■□□□ 1.29
APPP05067 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
APPP05067 FSCN1P1-201ENST00000568912 1481 ntBASIC23.09■■□□□ 1.29
APPP05067 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
APPP05067 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
APPP05067 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
APPP05067 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
APPP05067 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
APPP05067 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
APPP05067 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
APPP05067 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
APPP05067 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC23.08■■□□□ 1.29
APPP05067 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC23.08■■□□□ 1.29
APPP05067 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
APPP05067 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
APPP05067 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC23.08■■□□□ 1.29
APPP05067 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
APPP05067 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
APPP05067 AC116562.2-201ENST00000507042 360 ntBASIC23.08■■□□□ 1.29
APPP05067 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
APPP05067 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC23.08■■□□□ 1.29
APPP05067 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC23.08■■□□□ 1.29
APPP05067 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
APPP05067 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.29
APPP05067 RCC2P6-201ENST00000526625 1557 ntBASIC23.08■■□□□ 1.29
APPP05067 AC104417.2-201ENST00000562989 1793 ntBASIC23.08■■□□□ 1.29
APPP05067 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
APPP05067 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
APPP05067 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.28
APPP05067 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC23.08■■□□□ 1.28
APPP05067 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
APPP05067 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
APPP05067 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
APPP05067 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC23.07■■□□□ 1.28
APPP05067 B3GAT3P1-201ENST00000471720 806 ntBASIC23.07■■□□□ 1.28
APPP05067 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC23.07■■□□□ 1.28
APPP05067 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC23.07■■□□□ 1.28
APPP05067 SNX21-213ENST00000614929 587 ntTSL 5 BASIC23.07■■□□□ 1.28
APPP05067 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC23.07■■□□□ 1.28
APPP05067 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC23.07■■□□□ 1.28
APPP05067 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
APPP05067 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
APPP05067 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
APPP05067 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
APPP05067 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
APPP05067 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
APPP05067 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
APPP05067 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
APPP05067 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms