Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV17A0A0B4J275 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV17A0A0B4J275 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.44■□□□□ 0.38
TRAV17A0A0B4J275 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV17A0A0B4J275 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV17A0A0B4J275 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.44■□□□□ 0.38
TRAV17A0A0B4J275 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.44■□□□□ 0.38
TRAV17A0A0B4J275 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV17A0A0B4J275 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.44■□□□□ 0.38
TRAV17A0A0B4J275 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
TRAV17A0A0B4J275 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.44■□□□□ 0.38
TRAV17A0A0B4J275 AL441883.1-201ENST00000566170 1045 ntBASIC17.44■□□□□ 0.38
TRAV17A0A0B4J275 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV17A0A0B4J275 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV17A0A0B4J275 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV17A0A0B4J275 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.44■□□□□ 0.38
TRAV17A0A0B4J275 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV17A0A0B4J275 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.44■□□□□ 0.38
TRAV17A0A0B4J275 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.44■□□□□ 0.38
TRAV17A0A0B4J275 AL391422.3-201ENST00000603791 2761 ntBASIC17.44■□□□□ 0.38
TRAV17A0A0B4J275 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV17A0A0B4J275 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV17A0A0B4J275 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV17A0A0B4J275 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV17A0A0B4J275 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV17A0A0B4J275 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV17A0A0B4J275 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.43■□□□□ 0.38
TRAV17A0A0B4J275 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV17A0A0B4J275 AL359075.1-203ENST00000462729 1002 ntBASIC17.43■□□□□ 0.38
TRAV17A0A0B4J275 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.43■□□□□ 0.38
TRAV17A0A0B4J275 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.43■□□□□ 0.38
TRAV17A0A0B4J275 NEK4P2-201ENST00000580004 1012 ntBASIC17.43■□□□□ 0.38
TRAV17A0A0B4J275 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.43■□□□□ 0.38
TRAV17A0A0B4J275 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.43■□□□□ 0.38
TRAV17A0A0B4J275 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV17A0A0B4J275 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.43■□□□□ 0.38
TRAV17A0A0B4J275 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV17A0A0B4J275 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRAV17A0A0B4J275 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV17A0A0B4J275 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV17A0A0B4J275 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
TRAV17A0A0B4J275 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRAV17A0A0B4J275 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV17A0A0B4J275 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.43■□□□□ 0.38
TRAV17A0A0B4J275 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRAV17A0A0B4J275 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV17A0A0B4J275 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TRAV17A0A0B4J275 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TRAV17A0A0B4J275 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
TRAV17A0A0B4J275 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.42■□□□□ 0.38
TRAV17A0A0B4J275 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV17A0A0B4J275 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TRAV17A0A0B4J275 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV17A0A0B4J275 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV17A0A0B4J275 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAV17A0A0B4J275 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV17A0A0B4J275 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV17A0A0B4J275 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAV17A0A0B4J275 AL671277.2-201ENST00000458060 996 ntBASIC17.42■□□□□ 0.38
TRAV17A0A0B4J275 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.42■□□□□ 0.38
TRAV17A0A0B4J275 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAV17A0A0B4J275 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.42■□□□□ 0.38
TRAV17A0A0B4J275 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TRAV17A0A0B4J275 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.42■□□□□ 0.38
TRAV17A0A0B4J275 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAV17A0A0B4J275 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAV17A0A0B4J275 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAV17A0A0B4J275 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TRAV17A0A0B4J275 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV17A0A0B4J275 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV17A0A0B4J275 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV17A0A0B4J275 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV17A0A0B4J275 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV17A0A0B4J275 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV17A0A0B4J275 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.42■□□□□ 0.38
TRAV17A0A0B4J275 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.42■□□□□ 0.38
TRAV17A0A0B4J275 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.42■□□□□ 0.38
TRAV17A0A0B4J275 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAV17A0A0B4J275 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV17A0A0B4J275 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV17A0A0B4J275 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAV17A0A0B4J275 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
TRAV17A0A0B4J275 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
TRAV17A0A0B4J275 AL137060.1-201ENST00000618151 2648 ntBASIC17.41■□□□□ 0.38
TRAV17A0A0B4J275 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAV17A0A0B4J275 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV17A0A0B4J275 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV17A0A0B4J275 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.41■□□□□ 0.38
TRAV17A0A0B4J275 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.41■□□□□ 0.38
TRAV17A0A0B4J275 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.41■□□□□ 0.38
TRAV17A0A0B4J275 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV17A0A0B4J275 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV17A0A0B4J275 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV17A0A0B4J275 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAV17A0A0B4J275 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.41■□□□□ 0.38
TRAV17A0A0B4J275 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.41■□□□□ 0.38
TRAV17A0A0B4J275 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAV17A0A0B4J275 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.41■□□□□ 0.38
TRAV17A0A0B4J275 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
TRAV17A0A0B4J275 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms