Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 SYPL1P1-201ENST00000473622 768 ntBASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 HMGB1P38-201ENST00000490557 577 ntBASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 AC092185.1-201ENST00000491371 97 ntBASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 AC108941.1-201ENST00000502853 530 ntBASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 AK3P4-201ENST00000504283 583 ntBASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 AC025674.1-201ENST00000507074 324 ntBASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 AC118282.2-201ENST00000508739 374 ntBASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 AC106806.2-201ENST00000509365 500 ntBASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 ARL2BPP6-201ENST00000512757 439 ntBASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 AP001207.1-201ENST00000524051 481 ntBASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 MTCYBP41-201ENST00000528913 1123 ntBASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 AC006518.2-201ENST00000542513 940 ntBASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 CYP2C60P-201ENST00000566088 139 ntBASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 MIR4425-201ENST00000580572 84 ntBASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 AC113368.1-201ENST00000603736 382 ntBASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 AC002487.1-201ENST00000604565 994 ntBASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 AL158211.2-201ENST00000607282 395 ntBASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 AL512624.1-201ENST00000613638 469 ntBASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 MIR7155-201ENST00000615925 56 ntBASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 AC068722.2-201ENST00000618734 544 ntBASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
KCNIP3Q9Y2W7 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 SNORA51.1-201ENST00000363243 140 ntBASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 MIR649-201ENST00000384843 97 ntBASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 MTND2P16-201ENST00000419987 799 ntBASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 AL513174.1-201ENST00000423182 629 ntBASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 AC006989.1-201ENST00000427212 131 ntBASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 AL360081.1-201ENST00000428299 555 ntBASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 AL138878.2-201ENST00000440581 1241 ntBASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 AC006463.2-201ENST00000473326 348 ntBASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 RPS17P11-201ENST00000474297 293 ntBASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 OR5H5P-201ENST00000503164 928 ntBASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 RNU5A-7P-201ENST00000515979 116 ntBASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 RN7SKP116-201ENST00000516902 319 ntBASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 AL139174.1-201ENST00000531489 886 ntBASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 AL121766.1-201ENST00000547436 487 ntBASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 MIR4310-201ENST00000582950 57 ntBASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 AL365400.2-201ENST00000605604 902 ntBASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 AL354760.1-201ENST00000608357 643 ntBASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 MIR6868-201ENST00000611215 58 ntBASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 PLCE1P1-201ENST00000622094 305 ntBASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 AC098679.5-201ENST00000624394 571 ntBASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
KCNIP3Q9Y2W7 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
KCNIP3Q9Y2W7 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms