Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RN7SL303P-201ENST00000469773 251 ntBASIC4.91□□□□□ -1.62
SSX2IPQ9Y2D8 AC068724.1-201ENST00000487100 792 ntBASIC4.91□□□□□ -1.62
SSX2IPQ9Y2D8 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SSX2IPQ9Y2D8 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SSX2IPQ9Y2D8 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.91□□□□□ -1.62
SSX2IPQ9Y2D8 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.91□□□□□ -1.62
SSX2IPQ9Y2D8 HIGD1AP6-201ENST00000521833 279 ntBASIC4.91□□□□□ -1.62
SSX2IPQ9Y2D8 OR5AK1P-201ENST00000524837 922 ntBASIC4.91□□□□□ -1.62
SSX2IPQ9Y2D8 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.91□□□□□ -1.62
SSX2IPQ9Y2D8 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.91□□□□□ -1.62
SSX2IPQ9Y2D8 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.91□□□□□ -1.62
SSX2IPQ9Y2D8 AL391156.1-201ENST00000554965 554 ntBASIC4.91□□□□□ -1.62
SSX2IPQ9Y2D8 AC068831.4-201ENST00000556118 109 ntBASIC4.91□□□□□ -1.62
SSX2IPQ9Y2D8 AC007599.1-201ENST00000568688 1174 ntBASIC4.91□□□□□ -1.62
SSX2IPQ9Y2D8 CYCSP40-201ENST00000575927 294 ntBASIC4.91□□□□□ -1.62
SSX2IPQ9Y2D8 KPNA2P3-201ENST00000584190 848 ntBASIC4.91□□□□□ -1.62
SSX2IPQ9Y2D8 AC008759.1-201ENST00000589783 983 ntBASIC4.91□□□□□ -1.62
SSX2IPQ9Y2D8 VN1R92P-201ENST00000598511 928 ntBASIC4.91□□□□□ -1.62
SSX2IPQ9Y2D8 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.91□□□□□ -1.62
SSX2IPQ9Y2D8 AC245297.2-201ENST00000610119 565 ntBASIC4.91□□□□□ -1.62
SSX2IPQ9Y2D8 AC023043.4-201ENST00000612081 449 ntBASIC4.91□□□□□ -1.62
SSX2IPQ9Y2D8 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.91□□□□□ -1.62
SSX2IPQ9Y2D8 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SSX2IPQ9Y2D8 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SSX2IPQ9Y2D8 AC092656.1-203ENST00000624134 423 ntBASIC4.91□□□□□ -1.62
SSX2IPQ9Y2D8 AC090582.1-201ENST00000636321 199 ntBASIC4.91□□□□□ -1.62
SSX2IPQ9Y2D8 AC087190.4-201ENST00000574616 8334 ntBASIC4.91□□□□□ -1.62
SSX2IPQ9Y2D8 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSX2IPQ9Y2D8 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SSX2IPQ9Y2D8 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.91□□□□□ -1.62
SSX2IPQ9Y2D8 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSX2IPQ9Y2D8 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SSX2IPQ9Y2D8 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.91□□□□□ -1.62
SSX2IPQ9Y2D8 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSX2IPQ9Y2D8 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SSX2IPQ9Y2D8 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SSX2IPQ9Y2D8 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SSX2IPQ9Y2D8 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.9□□□□□ -1.62
SSX2IPQ9Y2D8 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SSX2IPQ9Y2D8 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SSX2IPQ9Y2D8 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SSX2IPQ9Y2D8 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.9□□□□□ -1.62
SSX2IPQ9Y2D8 AC021146.4-201ENST00000309229 279 ntBASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 RNU6-582P-201ENST00000362989 107 ntBASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 SUGT1P1-201ENST00000379514 476 ntBASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 Y_RNA.559-201ENST00000384686 107 ntBASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 RNA5SP372-201ENST00000390836 115 ntBASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 Y_RNA.599-201ENST00000410489 109 ntBASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 RNU6-272P-201ENST00000411028 104 ntBASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 AC004975.1-201ENST00000428733 208 ntBASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 DYNLL1P7-201ENST00000429273 258 ntBASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 MTND1P34-201ENST00000438556 671 ntBASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 CBX1P1-201ENST00000440184 427 ntBASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 MTND1P30-201ENST00000441241 901 ntBASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 AL354710.1-201ENST00000453641 246 ntBASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 AC072039.1-201ENST00000477611 581 ntBASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 RNU6-885P-201ENST00000516607 104 ntBASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 AP001207.1-201ENST00000524051 481 ntBASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 FKBP1BP1-201ENST00000553366 325 ntBASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 AC011260.1-201ENST00000578420 472 ntBASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 RSL24D1P11-201ENST00000591045 491 ntBASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 IMMP1LP1-201ENST00000605170 488 ntBASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 AC006270.3-201ENST00000605967 1036 ntBASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 AC091946.2-201ENST00000606105 291 ntBASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 AP000254.1-201ENST00000609934 520 ntBASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 AL031667.3-201ENST00000620124 655 ntBASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 AC068831.8-201ENST00000620171 435 ntBASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 AC140113.4-201ENST00000622087 222 ntBASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 MKKS-204ENST00000639674 192 ntBASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 AC107982.1-201ENST00000507171 1300 ntBASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 AL672167.1-205ENST00000641112 3080 ntBASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.9□□□□□ -1.63
SSX2IPQ9Y2D8 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms