Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RNF6Q9Y252 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
RNF6Q9Y252 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
RNF6Q9Y252 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RNF6Q9Y252 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RNF6Q9Y252 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.63□□□□□ -1.83
RNF6Q9Y252 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.63□□□□□ -1.83
RNF6Q9Y252 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
RNF6Q9Y252 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RNF6Q9Y252 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.62□□□□□ -1.83
RNF6Q9Y252 SNORA60-201ENST00000362396 134 ntBASIC3.62□□□□□ -1.83
RNF6Q9Y252 SNORA70.4-201ENST00000365509 134 ntBASIC3.62□□□□□ -1.83
RNF6Q9Y252 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
RNF6Q9Y252 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
RNF6Q9Y252 RPL22P22-201ENST00000395439 379 ntBASIC3.62□□□□□ -1.83
RNF6Q9Y252 HSPE1P8-201ENST00000406997 288 ntBASIC3.62□□□□□ -1.83
RNF6Q9Y252 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.62□□□□□ -1.83
RNF6Q9Y252 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.62□□□□□ -1.83
RNF6Q9Y252 RPL21P109-201ENST00000422213 475 ntBASIC3.62□□□□□ -1.83
RNF6Q9Y252 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.62□□□□□ -1.83
RNF6Q9Y252 AC234064.1-201ENST00000436312 247 ntBASIC3.62□□□□□ -1.83
RNF6Q9Y252 SKP1P1-201ENST00000438081 489 ntBASIC3.62□□□□□ -1.83
RNF6Q9Y252 AP000949.1-201ENST00000438328 629 ntBASIC3.62□□□□□ -1.83
RNF6Q9Y252 HMGB1P37-201ENST00000439613 609 ntBASIC3.62□□□□□ -1.83
RNF6Q9Y252 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.62□□□□□ -1.83
RNF6Q9Y252 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.62□□□□□ -1.83
RNF6Q9Y252 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.62□□□□□ -1.83
RNF6Q9Y252 NAP1L1P3-201ENST00000462291 880 ntBASIC3.62□□□□□ -1.83
RNF6Q9Y252 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RNF6Q9Y252 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.62□□□□□ -1.83
RNF6Q9Y252 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.62□□□□□ -1.83
RNF6Q9Y252 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.62□□□□□ -1.83
RNF6Q9Y252 IGKV2D-23-201ENST00000518179 286 ntBASIC3.62□□□□□ -1.83
RNF6Q9Y252 HIGD1AP6-201ENST00000521833 279 ntBASIC3.62□□□□□ -1.83
RNF6Q9Y252 MTND1P36-201ENST00000522384 936 ntBASIC3.62□□□□□ -1.83
RNF6Q9Y252 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.62□□□□□ -1.83
RNF6Q9Y252 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.62□□□□□ -1.83
RNF6Q9Y252 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.62□□□□□ -1.83
RNF6Q9Y252 CYB5AP5-201ENST00000549779 389 ntBASIC3.62□□□□□ -1.83
RNF6Q9Y252 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.62□□□□□ -1.83
RNF6Q9Y252 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.62□□□□□ -1.83
RNF6Q9Y252 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.62□□□□□ -1.83
RNF6Q9Y252 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.62□□□□□ -1.83
RNF6Q9Y252 MTCYBP28-201ENST00000566728 1132 ntBASIC3.62□□□□□ -1.83
RNF6Q9Y252 AC025627.2-201ENST00000576220 160 ntBASIC3.62□□□□□ -1.83
RNF6Q9Y252 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.62□□□□□ -1.83
RNF6Q9Y252 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.62□□□□□ -1.83
RNF6Q9Y252 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RNF6Q9Y252 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.62□□□□□ -1.83
RNF6Q9Y252 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.62□□□□□ -1.83
RNF6Q9Y252 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.62□□□□□ -1.83
RNF6Q9Y252 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.62□□□□□ -1.83
RNF6Q9Y252 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.62□□□□□ -1.83
RNF6Q9Y252 AC004777.1-201ENST00000624317 287 ntBASIC3.62□□□□□ -1.83
RNF6Q9Y252 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.62□□□□□ -1.83
RNF6Q9Y252 AC012442.3-202ENST00000636742 206 ntBASIC3.62□□□□□ -1.83
RNF6Q9Y252 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.62□□□□□ -1.83
RNF6Q9Y252 MTCO1P14-201ENST00000441695 1559 ntBASIC3.62□□□□□ -1.83
RNF6Q9Y252 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
RNF6Q9Y252 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RNF6Q9Y252 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RNF6Q9Y252 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.61□□□□□ -1.83
RNF6Q9Y252 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RNF6Q9Y252 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
RNF6Q9Y252 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
RNF6Q9Y252 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RNF6Q9Y252 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RNF6Q9Y252 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.61□□□□□ -1.83
RNF6Q9Y252 RNU6-1243P-201ENST00000364028 107 ntBASIC3.61□□□□□ -1.83
RNF6Q9Y252 OR6K3-202ENST00000368146 996 ntBASIC3.61□□□□□ -1.83
RNF6Q9Y252 RNU6-932P-201ENST00000391108 106 ntBASIC3.61□□□□□ -1.83
RNF6Q9Y252 HLFP1-201ENST00000402375 499 ntBASIC3.61□□□□□ -1.83
RNF6Q9Y252 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.61□□□□□ -1.83
RNF6Q9Y252 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.61□□□□□ -1.83
RNF6Q9Y252 TAF13P2-201ENST00000416876 286 ntBASIC3.61□□□□□ -1.83
RNF6Q9Y252 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RNF6Q9Y252 RPL23AP33-201ENST00000442301 452 ntBASIC3.61□□□□□ -1.83
RNF6Q9Y252 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.61□□□□□ -1.83
RNF6Q9Y252 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.61□□□□□ -1.83
RNF6Q9Y252 RPL29P29-201ENST00000448725 423 ntBASIC3.61□□□□□ -1.83
RNF6Q9Y252 RPS17P13-201ENST00000448974 407 ntBASIC3.61□□□□□ -1.83
RNF6Q9Y252 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.61□□□□□ -1.83
RNF6Q9Y252 CDC42P1-201ENST00000456658 548 ntBASIC3.61□□□□□ -1.83
RNF6Q9Y252 RNU7-140P-201ENST00000459546 60 ntBASIC3.61□□□□□ -1.83
RNF6Q9Y252 RPL21P71-201ENST00000465598 459 ntBASIC3.61□□□□□ -1.83
RNF6Q9Y252 RPL7L1P8-201ENST00000469911 741 ntBASIC3.61□□□□□ -1.83
RNF6Q9Y252 AC087879.1-201ENST00000474343 374 ntBASIC3.61□□□□□ -1.83
RNF6Q9Y252 AC092902.1-201ENST00000486999 259 ntBASIC3.61□□□□□ -1.83
RNF6Q9Y252 AL139099.1-201ENST00000497398 403 ntBASIC3.61□□□□□ -1.83
RNF6Q9Y252 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.61□□□□□ -1.83
RNF6Q9Y252 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.61□□□□□ -1.83
RNF6Q9Y252 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.61□□□□□ -1.83
RNF6Q9Y252 AC016065.2-201ENST00000514530 444 ntBASIC3.61□□□□□ -1.83
RNF6Q9Y252 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.61□□□□□ -1.83
RNF6Q9Y252 TRMT10BP1-201ENST00000519377 943 ntBASIC3.61□□□□□ -1.83
RNF6Q9Y252 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.61□□□□□ -1.83
RNF6Q9Y252 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.61□□□□□ -1.83
RNF6Q9Y252 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.61□□□□□ -1.83
RNF6Q9Y252 AC092747.2-201ENST00000545069 983 ntBASIC3.61□□□□□ -1.83
RNF6Q9Y252 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms