Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 RNA5SP284-201ENST00000384547 118 ntBASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 AL109755.1-201ENST00000401791 649 ntBASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 E2F6P2-201ENST00000420708 748 ntBASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 AL353662.1-201ENST00000439099 327 ntBASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 CRYGGP-201ENST00000443337 145 ntBASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 MED28P3-201ENST00000444288 531 ntBASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 RPL23AP60-201ENST00000450011 454 ntBASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 AC092451.1-201ENST00000480211 153 ntBASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 AC110794.1-201ENST00000505816 425 ntBASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 AC139365.2-201ENST00000517972 253 ntBASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 AC022360.1-201ENST00000521058 340 ntBASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 AC027544.3-201ENST00000535082 757 ntBASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 AC090022.1-201ENST00000546569 311 ntBASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 MIR5095-201ENST00000578844 88 ntBASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 MIR4433B-201ENST00000581329 102 ntBASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 RN7SL404P-201ENST00000582421 281 ntBASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 AL138889.2-201ENST00000603883 242 ntBASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 AC013244.1-201ENST00000604279 193 ntBASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 AL354984.3-201ENST00000604803 325 ntBASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 CYCSP1-201ENST00000604815 315 ntBASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 AC145423.1-201ENST00000605712 336 ntBASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 AC074140.1-201ENST00000621617 208 ntBASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 AC011592.1-201ENST00000624647 3634 ntBASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
LIMD1Q9UGP4 AC008957.3-201ENST00000624112 2242 ntBASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 AC009229.4-201ENST00000623854 1947 ntBASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 RNA5SP110-201ENST00000362638 115 ntBASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 Y_RNA.399-201ENST00000383955 105 ntBASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 RNU6-754P-201ENST00000391166 107 ntBASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 BX682237.1-201ENST00000415016 335 ntBASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 AC079922.1-201ENST00000443291 359 ntBASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 ACA64.1-201ENST00000459171 127 ntBASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 RN7SL273P-201ENST00000481561 299 ntBASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 AC010350.1-201ENST00000504908 231 ntBASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 RNU6-685P-201ENST00000517088 95 ntBASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 AC106785.4-201ENST00000569492 412 ntBASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 AC020910.3-201ENST00000603701 874 ntBASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 AL451044.1-201ENST00000604867 238 ntBASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 AL137003.2-201ENST00000606924 2538 ntBASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 AC011755.1-201ENST00000623763 2049 ntBASIC6.66□□□□□ -1.34
LIMD1Q9UGP4 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.65□□□□□ -1.34
LIMD1Q9UGP4 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
LIMD1Q9UGP4 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.34
LIMD1Q9UGP4 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.65□□□□□ -1.34
LIMD1Q9UGP4 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
LIMD1Q9UGP4 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms