Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
BLOC1S4Q9NUP1 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 SNORD35B-201ENST00000363660 87 ntBASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 snoZ40.1-201ENST00000364540 72 ntBASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 SNORD116-12-201ENST00000384468 92 ntBASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 SNORA3C-201ENST00000408792 125 ntBASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 RNU2-28P-201ENST00000410457 189 ntBASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 KRR1P1-201ENST00000419430 803 ntBASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 USP12PY-201ENST00000427677 1064 ntBASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 C4BPAP2-201ENST00000428434 478 ntBASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 RPL31P54-201ENST00000429803 370 ntBASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 AC011742.1-201ENST00000431448 434 ntBASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 RPL38P1-201ENST00000460914 211 ntBASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 RPL7P19-201ENST00000469948 618 ntBASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 RPL23AP44-201ENST00000482216 473 ntBASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 MTCYBP16-201ENST00000509187 1129 ntBASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 MTCYBP37-201ENST00000510642 1133 ntBASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 SNORA31.9-201ENST00000516429 84 ntBASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 AC008127.2-201ENST00000549925 1075 ntBASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 AC025627.2-201ENST00000576220 160 ntBASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 BNIP3P39-201ENST00000601077 554 ntBASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 AC091057.3-201ENST00000602684 733 ntBASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 AC233280.2-201ENST00000603917 1070 ntBASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 AL591034.3-201ENST00000605511 685 ntBASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 AC091946.2-201ENST00000606105 291 ntBASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 MIR6868-201ENST00000611215 58 ntBASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 AC022960.3-201ENST00000619794 441 ntBASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
BLOC1S4Q9NUP1 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 GDI2P1-201ENST00000429312 1336 ntBASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 Y_RNA.25-201ENST00000362528 102 ntBASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 SNORA62-201ENST00000365493 153 ntBASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 RNA5SP56-201ENST00000410277 118 ntBASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 AC106883.1-201ENST00000418805 562 ntBASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 MRPS36P1-201ENST00000421291 307 ntBASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 AC244098.2-201ENST00000422068 99 ntBASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 RPS11P1-201ENST00000451072 473 ntBASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 RPS20P32-201ENST00000456044 356 ntBASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 snoU13.3-201ENST00000459441 104 ntBASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 AC108734.3-201ENST00000481241 1165 ntBASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 CEACAMP10-202ENST00000495431 496 ntBASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 AC078918.1-201ENST00000498515 228 ntBASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 RNU6-1261P-201ENST00000517194 104 ntBASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 AC010928.3-201ENST00000587712 541 ntBASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 AL669831.4-202ENST00000590817 238 ntBASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 AL451044.1-201ENST00000604867 238 ntBASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 AC024933.1-201ENST00000608472 348 ntBASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 AC231759.1-201ENST00000616455 597 ntBASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 AC073968.1-201ENST00000618594 637 ntBASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 AL713922.2-201ENST00000619384 716 ntBASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 AC010608.3-201ENST00000625048 527 ntBASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
BLOC1S4Q9NUP1 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms