Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.83□□□□□ -1.64
SEC61A2Q9H9S3 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 LINC00622-201ENST00000562811 1570 ntBASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 AP002907.1-201ENST00000606361 1430 ntBASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 AL450345.1-202ENST00000605741 3881 ntBASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 Y_RNA.132-201ENST00000363421 102 ntBASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 RNA5SP132-201ENST00000364725 118 ntBASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 RNU6-359P-201ENST00000365466 108 ntBASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 AL122016.1-201ENST00000403365 367 ntBASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 RPL35AP24-201ENST00000413846 330 ntBASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 MTCO3P12-201ENST00000416718 547 ntBASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 AC007394.1-201ENST00000421941 531 ntBASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 MTCO2P5-201ENST00000422621 426 ntBASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 AC233981.1-201ENST00000423224 461 ntBASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 EIF1P3-201ENST00000423841 334 ntBASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 OR4F13P-201ENST00000428478 931 ntBASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 RSU1P2-202ENST00000437884 485 ntBASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 SEPT14P3-201ENST00000439401 183 ntBASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 AL732372.2-207ENST00000445840 183 ntBASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 SEPT14P2-201ENST00000453405 183 ntBASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 AC233279.1-201ENST00000455300 423 ntBASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 AC018638.3-201ENST00000461273 132 ntBASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 RPS3AP50-201ENST00000487064 803 ntBASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 RN7SL547P-201ENST00000490793 290 ntBASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 AC139783.2-201ENST00000504847 1145 ntBASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 AC026427.2-201ENST00000506228 536 ntBASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 AC011411.1-201ENST00000509592 876 ntBASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 SEPT14P4-201ENST00000513445 186 ntBASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 RNU6-327P-201ENST00000516270 127 ntBASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 RNU6-1003P-201ENST00000517099 105 ntBASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 FO082796.1-201ENST00000523795 183 ntBASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 AC022690.1-201ENST00000526681 550 ntBASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 MAGOH2P-202ENST00000584384 429 ntBASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 AC008687.2-201ENST00000597865 520 ntBASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 MIR6768-201ENST00000610734 72 ntBASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 AC090527.3-201ENST00000619041 548 ntBASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.82□□□□□ -1.64
SEC61A2Q9H9S3 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 AC011755.1-201ENST00000623763 2049 ntBASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 RNU6-456P-201ENST00000384493 107 ntBASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 RNU6-952P-201ENST00000391164 108 ntBASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 OR3A2-201ENST00000408891 1076 ntBASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 AL592293.2-201ENST00000422292 996 ntBASIC4.81□□□□□ -1.64
SEC61A2Q9H9S3 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 186.5 ms