Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC3.82□□□□□ -1.8
VIPAS39Q9H9C1 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.82□□□□□ -1.8
VIPAS39Q9H9C1 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.82□□□□□ -1.8
VIPAS39Q9H9C1 RPL12P26-201ENST00000452430 487 ntBASIC3.82□□□□□ -1.8
VIPAS39Q9H9C1 RPL5P32-201ENST00000454085 879 ntBASIC3.82□□□□□ -1.8
VIPAS39Q9H9C1 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.82□□□□□ -1.8
VIPAS39Q9H9C1 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.82□□□□□ -1.8
VIPAS39Q9H9C1 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.82□□□□□ -1.8
VIPAS39Q9H9C1 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.82□□□□□ -1.8
VIPAS39Q9H9C1 AL049830.2-201ENST00000480072 201 ntBASIC3.82□□□□□ -1.8
VIPAS39Q9H9C1 AC021146.5-201ENST00000503544 545 ntBASIC3.82□□□□□ -1.8
VIPAS39Q9H9C1 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.82□□□□□ -1.8
VIPAS39Q9H9C1 AC118282.2-201ENST00000508739 374 ntBASIC3.82□□□□□ -1.8
VIPAS39Q9H9C1 IGKV2-23-201ENST00000518729 323 ntBASIC3.82□□□□□ -1.8
VIPAS39Q9H9C1 MTND2P26-201ENST00000528255 1029 ntBASIC3.82□□□□□ -1.8
VIPAS39Q9H9C1 PTP4A1P6-201ENST00000531034 478 ntBASIC3.82□□□□□ -1.8
VIPAS39Q9H9C1 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.82□□□□□ -1.8
VIPAS39Q9H9C1 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VIPAS39Q9H9C1 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.82□□□□□ -1.8
VIPAS39Q9H9C1 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.82□□□□□ -1.8
VIPAS39Q9H9C1 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.82□□□□□ -1.8
VIPAS39Q9H9C1 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.82□□□□□ -1.8
VIPAS39Q9H9C1 AC091057.3-201ENST00000602684 733 ntBASIC3.82□□□□□ -1.8
VIPAS39Q9H9C1 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.82□□□□□ -1.8
VIPAS39Q9H9C1 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.82□□□□□ -1.8
VIPAS39Q9H9C1 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
VIPAS39Q9H9C1 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.82□□□□□ -1.8
VIPAS39Q9H9C1 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.82□□□□□ -1.8
VIPAS39Q9H9C1 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.82□□□□□ -1.8
VIPAS39Q9H9C1 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 AL021368.2-201ENST00000606125 5352 ntBASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 RN7SKP103-201ENST00000363848 320 ntBASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 RNA5SP424-201ENST00000390988 115 ntBASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 RNU2-21P-201ENST00000410368 188 ntBASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 AC017079.2-201ENST00000416102 485 ntBASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 AIMP1P1-201ENST00000418670 937 ntBASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 AL590762.4-201ENST00000425885 253 ntBASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 MTCYBP32-201ENST00000427945 1084 ntBASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 AL513175.1-201ENST00000431492 780 ntBASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 PTGES3P1-201ENST00000439531 483 ntBASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 snoU109.3-201ENST00000459477 145 ntBASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 AC104164.3-201ENST00000467363 1258 ntBASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 AC023632.1-201ENST00000518463 375 ntBASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 NDUFA5P2-201ENST00000519723 344 ntBASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 AC093331.1-201ENST00000521474 169 ntBASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 AC138701.1-201ENST00000524329 714 ntBASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 MTCO3P15-201ENST00000526563 574 ntBASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 MIR4504-201ENST00000577413 92 ntBASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 AC112220.2-201ENST00000605513 533 ntBASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 SNORA62.6-201ENST00000606322 83 ntBASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 AC011816.2-201ENST00000607089 556 ntBASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 AP005137.2-201ENST00000609238 400 ntBASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 MIR6864-201ENST00000617935 70 ntBASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 AC022149.2-201ENST00000621061 203 ntBASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 AC091953.3-201ENST00000623220 236 ntBASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 AC110801.1-201ENST00000623590 212 ntBASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 AC107081.3-201ENST00000612715 2034 ntBASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.81□□□□□ -1.8
VIPAS39Q9H9C1 AC005261.4-201ENST00000600047 1385 ntBASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 ZNF826P-207ENST00000622273 1910 ntBASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 DCAF13P3-201ENST00000561147 1334 ntBASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 RNU6-328P-201ENST00000390887 106 ntBASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 MTCO2P31-201ENST00000402702 684 ntBASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 AC016397.1-201ENST00000412463 242 ntBASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 AL139128.1-201ENST00000413921 941 ntBASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 MTND4P3-201ENST00000417829 541 ntBASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 AC027644.1-201ENST00000419595 298 ntBASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 AL049610.1-201ENST00000423374 372 ntBASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 BX890604.2-201ENST00000427883 474 ntBASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 ARF4P2-201ENST00000430209 526 ntBASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 RPS3AP54-201ENST00000435535 734 ntBASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 Z74696.2-201ENST00000436514 498 ntBASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 AC018635.1-201ENST00000468292 1030 ntBASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 RN7SL330P-201ENST00000469709 307 ntBASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VIPAS39Q9H9C1 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms