Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC090686.1-201ENST00000481577 749 ntBASIC5.13□□□□□ -1.59
VPS11Q9H270 NIP7P2-201ENST00000485801 544 ntBASIC5.13□□□□□ -1.59
VPS11Q9H270 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS11Q9H270 AC114786.4-201ENST00000508771 728 ntBASIC5.13□□□□□ -1.59
VPS11Q9H270 RNA5SP249-201ENST00000516127 99 ntBASIC5.13□□□□□ -1.59
VPS11Q9H270 AC012400.1-201ENST00000518452 381 ntBASIC5.13□□□□□ -1.59
VPS11Q9H270 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC5.13□□□□□ -1.59
VPS11Q9H270 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VPS11Q9H270 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS11Q9H270 AC008127.2-201ENST00000549925 1075 ntBASIC5.13□□□□□ -1.59
VPS11Q9H270 AC125611.2-201ENST00000551907 647 ntBASIC5.13□□□□□ -1.59
VPS11Q9H270 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS11Q9H270 AL390726.5-202ENST00000564800 256 ntBASIC5.13□□□□□ -1.59
VPS11Q9H270 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS11Q9H270 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.13□□□□□ -1.59
VPS11Q9H270 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS11Q9H270 RNF138P2-201ENST00000603490 592 ntBASIC5.13□□□□□ -1.59
VPS11Q9H270 SEPT7P9-203ENST00000604116 343 ntBASIC5.13□□□□□ -1.59
VPS11Q9H270 AC015982.1-201ENST00000608113 465 ntBASIC5.13□□□□□ -1.59
VPS11Q9H270 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS11Q9H270 RN7SL787P-201ENST00000613000 284 ntBASIC5.13□□□□□ -1.59
VPS11Q9H270 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS11Q9H270 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS11Q9H270 RNU6-156P-201ENST00000621869 107 ntBASIC5.13□□□□□ -1.59
VPS11Q9H270 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
VPS11Q9H270 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VPS11Q9H270 BRAFP1-201ENST00000445336 2703 ntBASIC5.13□□□□□ -1.59
VPS11Q9H270 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS11Q9H270 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS11Q9H270 DDX18P3-201ENST00000404856 2007 ntBASIC5.13□□□□□ -1.59
VPS11Q9H270 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VPS11Q9H270 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.12□□□□□ -1.59
VPS11Q9H270 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS11Q9H270 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS11Q9H270 OR55B1P-203ENST00000641518 2602 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
VPS11Q9H270 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
VPS11Q9H270 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
VPS11Q9H270 Y_RNA.18-201ENST00000362461 102 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS11Q9H270 RNU6-297P-201ENST00000384636 107 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 RNU1-149P-201ENST00000390870 161 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 AL078604.1-201ENST00000404609 466 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS11Q9H270 RN7SKP125-201ENST00000410481 302 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 RN7SKP56-201ENST00000410513 331 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS11Q9H270 AC068533.2-201ENST00000411872 306 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 RPL23AP39-201ENST00000415533 405 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS11Q9H270 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS11Q9H270 AC079807.1-201ENST00000429993 481 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS11Q9H270 CYCSP6-201ENST00000434498 302 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 MTND4LP10-201ENST00000435146 291 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 CYCSP12-201ENST00000437729 300 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS11Q9H270 MTCYBP6-201ENST00000441810 138 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 AL022238.1-201ENST00000442557 355 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 AC073109.1-201ENST00000445066 978 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS11Q9H270 HMGN1P36-201ENST00000446623 298 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS11Q9H270 PSPHP1-201ENST00000450062 261 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 NDUFA5P7-201ENST00000452914 242 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.12□□□□□ -1.59
VPS11Q9H270 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS11Q9H270 AP000893.1-201ENST00000474462 794 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS11Q9H270 RN7SL346P-201ENST00000491561 294 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 RN7SL441P-201ENST00000492388 296 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS11Q9H270 ATP1B1P1-201ENST00000509767 915 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 ENPP7P9-201ENST00000514456 627 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS11Q9H270 AC022790.1-201ENST00000522872 204 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 OR5AQ1P-201ENST00000527596 927 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS11Q9H270 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS11Q9H270 AC027544.3-201ENST00000535082 757 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.12□□□□□ -1.59
VPS11Q9H270 AC068446.3-201ENST00000555285 382 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 GTF2IP8-201ENST00000560687 584 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS11Q9H270 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS11Q9H270 MIR4795-201ENST00000584182 89 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 LLPHP1-201ENST00000603571 367 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 AC008277.2-201ENST00000605196 797 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 AL008729.2-201ENST00000606393 473 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 AL050343.2-201ENST00000607338 280 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 AL020991.1-201ENST00000612314 373 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 AL158209.2-201ENST00000619266 216 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 MIR8080-201ENST00000622224 89 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 AL691477.1-201ENST00000624398 162 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 AC120349.2-201ENST00000625002 298 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS11Q9H270 CYP4F35P-202ENST00000636121 390 ntBASIC5.12□□□□□ -1.59
VPS11Q9H270 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
VPS11Q9H270 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms