Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 EIF2AP4-201ENST00000424793 1781 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 AC025574.1-201ENST00000554784 1653 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 AC008033.1-201ENST00000216407 1162 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 RN7SKP124-201ENST00000364730 341 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 RNU6-761P-201ENST00000384148 107 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 RNU6-171P-201ENST00000384354 107 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 SNORA70E-201ENST00000384492 135 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 Y_RNA.548-201ENST00000384656 105 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 U3.20-201ENST00000390909 217 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 MRPL42P2-201ENST00000403169 426 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 BTF3P7-201ENST00000407097 488 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 RN7SKP235-201ENST00000410662 305 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 DPPA2P3-201ENST00000411853 655 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 AL627308.1-201ENST00000435693 821 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 MTND6P18-201ENST00000439477 513 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 CBX1P1-201ENST00000440184 427 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 Z95327.1-201ENST00000446082 482 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 AL589765.3-201ENST00000446084 462 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 AC012512.1-201ENST00000446594 718 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 FGF7P6-202ENST00000451282 293 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 FABP3P2-201ENST00000453169 399 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 HMGB1P29-201ENST00000505659 499 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 AC027369.5-201ENST00000533838 755 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 AC234778.2-201ENST00000566241 354 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 AL356432.3-201ENST00000568952 465 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 MIR1269B-201ENST00000580405 75 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 SUGT1P3-202ENST00000604259 383 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 AL451044.1-201ENST00000604867 238 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 AC121334.2-201ENST00000605387 271 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 AL109618.2-201ENST00000605527 211 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 AC092954.2-201ENST00000609103 430 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 AL391813.2-201ENST00000609113 322 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 AC012150.2-201ENST00000621300 544 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 AC018445.2-201ENST00000622987 260 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 CU639417.4-201ENST00000623928 207 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 AC024560.2-201ENST00000507981 1497 ntBASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM55Q9BYV6 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 AL138820.1-201ENST00000617901 5305 ntBASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 SNORD51-201ENST00000384320 80 ntBASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 Y_RNA.493-201ENST00000384422 102 ntBASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 MIR937-201ENST00000401271 86 ntBASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 AL009179.1-201ENST00000406085 265 ntBASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 RNA5SP296-201ENST00000410523 111 ntBASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 RNU2-8P-201ENST00000410727 190 ntBASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 CTSL3P-202ENST00000412179 788 ntBASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 AC245052.5-201ENST00000416320 649 ntBASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 RPL31P35-201ENST00000431058 377 ntBASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 CFL1P1-202ENST00000432948 411 ntBASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 AL596276.1-201ENST00000434465 418 ntBASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 AC012075.1-201ENST00000436549 580 ntBASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 RBMX2P4-201ENST00000441256 376 ntBASIC5.44□□□□□ -1.54
TRIM55Q9BYV6 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms