Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 Y_RNA.132-201ENST00000363421 102 ntBASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 Y_RNA.402-201ENST00000383972 102 ntBASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 MTCO3P40-201ENST00000392516 676 ntBASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 RNU2-42P-201ENST00000410697 113 ntBASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 AC013429.2-201ENST00000418798 781 ntBASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 SDCBPP3-201ENST00000419629 891 ntBASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 AL157827.1-201ENST00000447622 132 ntBASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 CALM1P2-201ENST00000452941 448 ntBASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 SNORD42A-201ENST00000459584 64 ntBASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 AP000797.1-201ENST00000478870 387 ntBASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 RPS3AP14-201ENST00000483907 780 ntBASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 AC087808.1-201ENST00000520501 361 ntBASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 OR5M7P-201ENST00000526140 972 ntBASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 AC090515.3-201ENST00000560431 315 ntBASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 PCMTD1P2-201ENST00000565017 355 ntBASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 MIR4480-201ENST00000582492 71 ntBASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 AL161729.3-201ENST00000603533 673 ntBASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 AL031320.1-201ENST00000604177 357 ntBASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 AC104687.2-201ENST00000604442 342 ntBASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 AL360085.1-201ENST00000604713 532 ntBASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 AL035413.2-201ENST00000604801 525 ntBASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 AL050343.2-201ENST00000607338 280 ntBASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 Y_RNA.812-201ENST00000610788 101 ntBASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 AL365204.3-201ENST00000612448 685 ntBASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 Y_RNA.784-201ENST00000613803 101 ntBASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 Y_RNA.787-201ENST00000616522 101 ntBASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 Y_RNA.780-201ENST00000617336 101 ntBASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 Y_RNA.801-201ENST00000619005 101 ntBASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 BX005214.3-202ENST00000619809 325 ntBASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
CDK5RAP1Q96SZ6 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 FRG1BP-201ENST00000278882 761 ntBASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 RPL21P132-201ENST00000331267 462 ntBASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 FRG1CP-201ENST00000358464 769 ntBASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 RNU6-433P-201ENST00000363216 104 ntBASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 RNU6-621P-201ENST00000364752 109 ntBASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 Y_RNA.409-201ENST00000383990 98 ntBASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 Y_RNA.419-201ENST00000384041 102 ntBASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 AL590004.1-201ENST00000405321 300 ntBASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 RPS3AP9-201ENST00000417027 792 ntBASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 AL050321.1-201ENST00000432363 400 ntBASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 SEPT7P5-201ENST00000434048 306 ntBASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 NDUFA5P4-201ENST00000436704 385 ntBASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 RPL7L1P1-201ENST00000448259 785 ntBASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 OR1H1P-201ENST00000448731 937 ntBASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 AURKAPS2-201ENST00000454983 333 ntBASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 AL133244.1-201ENST00000456007 258 ntBASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 RPL38P1-201ENST00000460914 211 ntBASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 MTCYBP43-201ENST00000513621 740 ntBASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 MTCO1P30-201ENST00000515244 580 ntBASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 RNY4P37-201ENST00000516225 96 ntBASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 AC105031.1-201ENST00000518550 476 ntBASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 AP006245.2-201ENST00000522004 300 ntBASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC5.12□□□□□ -1.59
CDK5RAP1Q96SZ6 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms